Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq13 150 4e-31 seq6 145 2e-29 seq3 145 2e-29 seq10 138 3e-27 seq1 136 1e-26 seq4 118 3e-21 >seq13 Length=1285846 Score = 150 bits (166), Expect = 4e-31 Identities = 151/196 (77%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 177935 GAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAA 177994 ||| || ||||| || || || |||||||| ||||| || || ||||||||||| || Sbjct 1260796 GAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTTGAGTCGTCCGACACCATCGACAA 1260855 Query 177995 CGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTT 178054 |||||| ||||| |||||||| ||||| |||||||| |||||||| || || ||||| Sbjct 1260856 CGTCAAGTCGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGTCTCATCTT 1260915 Query 178055 CGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATC 178114 ||| || || |||||||| || || | || || |||| || ||| |||| || || || Sbjct 1260916 CGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTC 1260975 Query 178115 AACACTGCATCTTGTT 178130 || || ||||||||| Sbjct 1260976 GACGCTCCATCTTGTT 1260991 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || ||||| ||||| || || ||||| || ||| || Sbjct 1261241 CAGATCTTCGTCAAGACTCTTACTGGAAAGACGATTACTCTGGAGGTTGAGTCCTCGGAT 1261300 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 1261301 ACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 1261360 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| || ||||| || |||||| | || || | ||||| ||| || Sbjct 1261361 CGCCTGATTTTCGCCGGCAAGCAGCTGGAGGATGGACGTACCCTCTCTGATTACAACATC 1261420 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 1261421 CAGAAGGAGTCCACTCTGCACCTCGT 1261446 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || || |||||||| || ||||| || ||| ||| Sbjct 1261013 CAGATCTTTGTCAAGACGTTGACGGGCAAGACGATCACGCTTGAGGTTGAGTCCTCGGAC 1261072 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| |||||||||||||| || || || || ||||||||||| Sbjct 1261073 ACGATTGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 1261132 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| |||||||| ||||| | ||||| | || || ||| || Sbjct 1261133 CGCCTGATTTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCTGACTACAACATC 1261192 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || || |||||| Sbjct 1261193 CAGAAGGAGTCCACCCTCCACCTTGTT 1261219 >seq6 Length=2834147 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || || || || |||||||| || ||| ||||||||||| |||||||| Sbjct 1117753 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 1117812 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || || ||||||||||| Sbjct 1117813 TCGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1117872 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | |||||| |||| || ||| |||| || || || || || Sbjct 1117873 AAGCAGCTCGAGGACGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGACCCTC 1117932 Query 178122 CATCTTGT 178129 || ||||| Sbjct 1117933 CACCTTGT 1117940 >seq3 Length=3240826 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || || ||||| |||||||| || ||| ||||||||||| |||||||| Sbjct 835154 CTCACCGGTAAGACCATCACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 835095 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || |||||||| |||||||| || || ||||||||||| Sbjct 835094 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTCGCCGGC 835035 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | || ||| |||| || ||| |||| || || || || || Sbjct 835034 AAGCAGCTCGAGGACGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACCCTC 834975 Query 178122 CATCTTGT 178129 || || || Sbjct 834974 CACCTCGT 834967 >seq10 Length=2164251 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || |||||||| |||||||| || || ||| Sbjct 2138751 CAGATCTTCGTGAAGACCCTCACGGGTAAGACGATCACTCTCGAGGTCGAGTCGTCCGAC 2138810 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||||||||| || || || ||||| |||||||| Sbjct 2138811 ACGATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAG 2138870 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || |||||||| || || | || || | || || ||| || Sbjct 2138871 CGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATC 2138930 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 2138931 CAGAAGGAGTCGACGCTCCACCTTGT 2138956 Score = 116 bits (128), Expect = 9e-21 Identities = 123/162 (76%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 177935 GAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAA 177994 ||| || ||||| || || || |||||||||||||| || || |||||||| || || Sbjct 2138251 GAAGACGCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCTGACACCATTGACAA 2138310 Query 177995 CGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTT 178054 |||||| |||||||||||||| || || ||||| || |||||||| || || ||||| Sbjct 2138311 CGTCAAGTCGAAGATTCAGGACAAGGAGGGGATCCCCCCCGACCAGCAGCGTCTCATCTT 2138370 Query 178055 CGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || || || ||||| || ||||| | || ||| | || || Sbjct 2138371 TGCTGGCAAGCAGCTTGAGGATGGTCGTACCCTTTCTGACTA 2138412 >seq1 Length=3718887 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || || |||||||| ||||| || ||| ||||||||||| |||||||| Sbjct 1833929 CTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 1833988 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || || ||||||||||| Sbjct 1833989 TCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1834048 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | || ||| | || || ||| |||| || || || || || Sbjct 1834049 AAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTC 1834108 Query 178122 CATCTTGT 178129 || || || Sbjct 1834109 CACCTCGT 1834116 >seq4 Length=3236612 Score = 118 bits (130), Expect = 3e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || || || || |||||||| || ||| ||||| ||||| ||||| || Sbjct 326391 CTTACGGGCAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACGATCGACAACGTTAAG 326332 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || |||||||||||||| Sbjct 326331 TCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTTATCTTCGCCGGC 326272 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || |||||||| ||||| | |||||| | || || Sbjct 326271 AAGCAGCTCGAGGATGGTCGCACTCTTTCTGACTA 326237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729410954504