Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq10 154 1e-32 seq13 147 2e-30 seq1 114 1e-20 seq6 109 5e-19 seq3 109 5e-19 seq4 89.7 5e-13 >seq10 Length=2164251 Score = 154 bits (170), Expect = 1e-32 Identities = 164/211 (78%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || || ||||| ||||||||| ||||| ||||| ||||||||||| |||| ||| Sbjct 2138956 ACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCG 2138897 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| || ||||| || || ||||| ||||| | |||| || |||||||||| || Sbjct 2138896 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC-TG 2138838 Query 41774 ATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 | | || | |||| ||| | | | |||||| |||||| ||||| | || ||||| | Sbjct 2138837 AATCTTCGACTTC-ACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCT 2138779 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || ||||| ||||| |||||||| Sbjct 2138778 TACCCGTGAGGGTCTTCACGAAGATCTGCAT 2138748 Score = 150 bits (166), Expect = 2e-31 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||| || || ||||||||| ||||| ||||||||| Sbjct 2138746 CCACCGCGGAGACGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 2138687 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||||||||| || ||||| ||||||||||| ||||| | ||| Sbjct 2138686 AGCGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 2138627 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| || | || | |||||| |||||| | Sbjct 2138626 ATCCCCTCCTTGTCCTGGATCTTCAACTTGACATTGTCG--ATCGTGTCGGACGACTCGA 2138569 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || ||||| ||||| ||||| |||||||| Sbjct 2138568 CCTCGAGAGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 2138520 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || ||||| ||||||||| ||||| ||||| ||| Sbjct 2139070 CCACCGCGGAGACGAAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 2139011 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTG 41745 |||||||| |||| ||||||||||| || ||||| || || ||||| || Sbjct 2139010 AGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTG 2138961 >seq13 Length=1285846 Score = 147 bits (162), Expect = 2e-30 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || ||| ||||||||| ||||| ||||| ||| Sbjct 1261236 CCACCACGCAGGCGGAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1261177 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||||||||| |||||||| ||||||||||| ||||||| |||| Sbjct 1261176 AGAGTACGACCATCCTCGAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 1261117 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| | ||||| | ||| | | | ||||| ||||| | Sbjct 1261116 ATACCCTCCTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCAATCGTGTCCGAGGACTCAA 1261059 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||| ||||| || ||||||| |||||| || || |||||||| Sbjct 1261058 CCTCAAGCGTGATCGTCTTGCCCGTCAACGTCTTGACAAAGATCTGCAT 1261010 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || ||||| ||| ||||||||| ||||| || || ||| Sbjct 1261464 CCTCCACGCAGACGAAGGACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAG 1261405 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||||||||| ||||||||||| ||||||| |||| Sbjct 1261404 AGGGTACGTCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 1261345 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | || || ||||| || Sbjct 1261344 ATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTATCCGAGGACTCAAC 1261286 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| || || || || ||||| ||||| |||||||| Sbjct 1261285 CTCCAGAGTAATCGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 1261238 Score = 129 bits (142), Expect = 5e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||| ||||| ||||||||| ||||| |||||||| Sbjct 1261008 CCACCGCGGAGACGAAGAACAAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1260949 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||| ||||| || || ||||| ||||| | || Sbjct 1260948 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 1260889 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || ||| ||| | | | |||||| |||||| || Sbjct 1260888 ATGCCTTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTGTCGGACGACTCAAC 1260830 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTT 41847 ||| | || || || || || || || ||||| Sbjct 1260829 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 1260797 >seq1 Length=3718887 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || ||||| | || || || || || ||||||||| ||||| ||||| Sbjct 1834137 CCACCACCACGCAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCC 1834078 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || |||||||| |||| |||||||||||||||||||| || || ||||| ||||| | | Sbjct 1834077 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGG 1834018 Query 41753 GGAACGCTCTCCTTGTCCATGATTTT 41778 || | || |||||||||| ||| || Sbjct 1834017 GGGATGCCCTCCTTGTCCTGGATCTT 1833992 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859 || ||||| || || || |||||||| |||||||| |||||| ||||||||| ||| Sbjct 1537355 CGCATCGCGCCGCGCTCAGGCCTCGCGGCGAAGCACGGCATCGACACGGGCGCCGGCGTC 1537296 Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGAAGAGGA 85918 ||||| |||||||| || | |||| |||| |||||||||||| || ||||| Sbjct 1537295 GTCGACTGTGACTACCGTGGCGAGGTCAAGGTCGTCCTCTTCAACCACAATGACGAGGA 1537237 >seq6 Length=2834147 Score = 109 bits (120), Expect = 5e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| |||||||| Sbjct 1117958 CCACCACGGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1117899 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || || ||||| ||||| | ||| Sbjct 1117898 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 1117839 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | | |||||||||| ||| || Sbjct 1117838 ATACCCTCCTTGTCCTGGATCTT 1117816 >seq3 Length=3240826 Score = 109 bits (120), Expect = 5e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| |||||||| Sbjct 834949 CCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAA 835008 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| || || ||||| ||||| | || Sbjct 835009 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGAGGG 835068 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | | |||||||||| ||| || Sbjct 835069 ATACCCTCCTTGTCCTGGATCTT 835091 >seq4 Length=3236612 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859 || || || || || || |||||||| ||||||||| || ||| ||||||||| ||| Sbjct 1877154 CGCATTGCGCCCCGCTCAGGCCTCGCTGCCAAGCACGGCATTGACACGGGCGCCGGCGTC 1877213 Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGAAGAGGA 85918 ||||| ||||||||||||| | |||| | || || ||||||||| ||| ||||| Sbjct 1877214 GTCGACTGCGACTACCGCGGAGAAGTCAAGGTTGTCCTGTTCAACCACAACGACGAGGA 1877272 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || || ||||| | || |||||||||||||||||||| || |||||||| ||| Sbjct 326237 TAGTCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGG 326296 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCT 41805 || | || | || |||||||||| ||| || ||| |||| | | | ||||| Sbjct 326297 TCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTT-AACGTTGTCGATCGTGTCCGA 326355 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAG 41841 ||||| ||||| | || || || || ||||| || Sbjct 326356 GGACTCGACCTCGAGAGTAATGGTCTTGCCCGTAAG 326391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303329659200