Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq12400 84.2 2e-11 >seq12400 Length=4870 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 16526 ATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCC 16585 || ||||| || || || || || || ||||| ||||| ||||| || |||| || Sbjct 1972 ATTTGAAAGCCGTAAAAACAACGTGCTTCCGCAATTTGAACTTCTCCGCTGAATCTCTCA 2031 Query 16586 GCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATG 16645 || |||||||| ||||| || || ||||| || || || | | ||||||||| Sbjct 2032 ATTAGATTCTCATTGACGATGCCATCTGAGGCAGCGAAGAATGCAAGAACATGCTTAATG 2091 Query 16646 AAATATTTTTCGTCAG-ATGTAAGAATATG--CCAATCTTTTAAATCTTTGGATATATCC 16702 |||| ||| ||||| | || || | || |||||| | | ||||| |||| ||| Sbjct 2092 AAATGTTTCTCGTCCGCATTTAGTTTTTTGTCCCAATCGTGCATGTCTTTAGATAGATCA 2151 Query 16703 ACTTCTTCTGGCGTCCAAAA 16722 | |||||| | ||||||||| Sbjct 2152 ATTTCTTCCGCCGTCCAAAA 2171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511032520474840