Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq5689 84.2 2e-11 >seq5689 Length=8510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 200/300 (67%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 || |||||||||| | | ||| || || || || |||||||| | | | | | Sbjct 3924 ACGTAAAATTGACACATCATATGGCAGGGGGGTAATGCCATTTTATCCAGAGCAGCAGGA 3983 Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||| | | ||| |||||||| ||||| || | |||| || ||| || Sbjct 3984 TTCCAAGCGGTGAGAATCATTCTTCTATCGGTAGGATTGTGGATGATAGAATGAATTAAA 4043 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046 | ||| | ||| || || |||| ||| |||||| || | ||| ||| ||||| Sbjct 4044 TTTTTAATTTGATCTACGCCTTGACCTGAATAATCATGCTTAGGACCAAGATAATCTGCA 4103 Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCC---TTCAT-CTCTGTC 102102 || ||||| | ||| ||||||||||| | || || ||| || ||||| ||| || Sbjct 4104 CCAAAATGACGCCATTGAAATCCATAAATTGGACCTAGAGTACCAGTTTCATAATCTTTC 4163 Query 102103 ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 || || | | ||||||| || ||| |||||||| | |||||| || | ||| || Sbjct 4164 ----AATCCGACTGAATCTAAATATTTTCTTGATCCATTTGGATCCCATATTTTCACCCC 4219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360988192982987