Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq1300 89.7 3e-13 >seq1300 Length=16371 Score = 89.7 bits (98), Expect = 3e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 12780 AATGGTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATC 12839 ||| ||||| || || | ||||||||| || || |||| ||| || ||| || || Sbjct 15111 AATTGTCATTCGTGATGGTATGGCATGTGGATTGATTATTACATCTGGACATATTCCTTC 15052 Query 12840 TTTAGTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGT 12899 | || || ||||| | |||||| ||||| |||||| || ||||||||| | Sbjct 15051 TGATGTAAATGGCATATCTTCTTGTCTATAAAGTATACCAACAGTTCCTTTTTGTCCATG 14992 Query 12900 AAAAGAAGCAAATTTATCTCCTATTTCAGGTATTTTTGGAGATCGTAATT-TAATTTTAA 12958 ||| ||||||||||||||| |||| ||||| || ||||| ||||| ||| ||| | Sbjct 14991 TCTAGATGCAAATTTATCTCCTGTTTCTGGTATACGTGTAGATC-TAATTCTAACTTTTA 14933 Query 12959 CAA 12961 ||| Sbjct 14932 CAA 14930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328125735751798