Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq7505 93.3 4e-14 >seq7505 Length=7180 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | ||||||||| || |||||||||||||| || || || Sbjct 2924 CCTCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCAGCT 2983 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || || || ||||| || ||| | || | || |||||| || || Sbjct 2984 AGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGA 3043 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||||| || || | | | ||||| || || Sbjct 3044 ATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTCAACC 3103 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAA 21154 || | ||||| |||||||||||||| Sbjct 3104 TCGAGTGTAATAGTCTTGCCGGTTAA 3129 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| || || || | ||| || | ||| | ||| ||||| |||||||||||||| || || Sbjct 1766 TCCTCCACGGAGACGGAGAACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGC 1825 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || ||| || | ||||| || ||||| || || |||| || | |||||| || || Sbjct 1826 CAATGTTCGGCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGCTGCTGATCAGGCGG 1885 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||| || ||||| || || ||||| | | | | || ||| | ||| Sbjct 1886 GATGCCCTCTTTGTCCTGAATTTTAGCCTTCACATTGTCAATTGTGTCAGACGATTCCAC 1945 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAA 21166 ||||| |||||||| || ||||| || | |||| ||| Sbjct 1946 TTCCAAAGTAATGGTTTTACCGGTCAAGCTGTTGAGAAA 1984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421951776432692