Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq5689 111 1e-19 >seq5689 Length=8510 Score = 111 bits (122), Expect = 1e-19 Identities = 208/300 (69%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTG---GAACATCTAAG 97287 || ||||| |||| || | ||| |||||||| || |||||||| || || | || Sbjct 3924 ACGTAAAATTGACACATCATATGGCAGGGGGGTAATGCCATTTTATCCAGAGCAGC--AG 3981 Query 97288 ACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT-TGTGTGTATGGTATTAAT 97346 ||||||||| | | ||||||||||||||| || || || || || | || ||| Sbjct 3982 G-ATTCCAAGCGGTGAGAATCATTCTTCTATCGGTAGGATTGTGGATG-ATAGAATGAAT 4039 Query 97347 TATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTC 97406 || | || | |||||| ||||||| || ||||| |||||| |||| |||| || Sbjct 4040 TAAATTTTTAATTTGATCTACGCCTTGACCTGAATAATCATGCTTAGGACCAAGATAATC 4099 Query 97407 TGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATC 97466 ||| |||||||| | |||||| |||||||||| || || || || ||| ||| Sbjct 4100 TGCACCAAAATGACGCCATTGAAATCCATAAATTGGACCTAGAGTACCAGTTTCATAATC 4159 Query 97467 ACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC 97526 || || | ||||||||| || |||||||||| |||||| || | ||| || Sbjct 4160 TTTCAATCCGACTGAATCTAAATATTTTCTTGATCCATTTGGATCCCATATTTTCACCCC 4219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346531525751090