Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq7505 122 1e-22 >seq7505 Length=7180 Score = 122 bits (134), Expect = 1e-22 Identities = 156/214 (73%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 124563 ACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAG 124622 || || ||||| || ||| | || | ||| | ||| |||||| ||| | || Sbjct 1969 ACCGGTAAAACCATTACTTTGGAAGTGGAATCGTCTGACACAATTGACAATGTGAAGGCT 1910 Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 |||||||| || ||||| || || || |||||||| || | || ||||| || || ||| Sbjct 1909 AAAATTCAGGACAAAGAGGGCATCCCGCCTGATCAGCAGCGTCTCATTTTCGCTGGTAAA 1850 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | |||||| | |||||||| | ||||||||| ||||||||||| |||||| | ||| Sbjct 1849 CAACTTGAGGATGGCCGAACATTGGCAGATTATAACATTCAAAAAGAGTCAACTCTTCAT 1790 Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 | ||| | ||| | || || || ||| ||||| Sbjct 1789 CTAGTTCTCCGTCTCCGTGGAGG-ATTGTAAATT 1757 Score = 114 bits (126), Expect = 2e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || ||||| |||||||| || || || || || ||| |||| ||||| || ||||| Sbjct 3352 AAGATCCAAGACAAAGAAGGCATTCCTCCGGACCAGCAACGGCTAATTTTCGCTGGAAAG 3293 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | |||||| | || || |||| ||||| || ||||| || ||||| || |||||| Sbjct 3292 CAACTCGAGGATGGCCGCACCTTAGCGGATTACAACATTCAGAAGGAATCGACCTTGCAT 3233 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 |||| |||| || ||||||||||| Sbjct 3232 CTGGTACTACGCTTGCGAGGTGGTAT 3207 Score = 102 bits (112), Expect = 1e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || ||||||||||| ||||| || ||||| ||||||||| || | ||||| || || || Sbjct 2781 AAGATTCAAGATAAGGAAGGCATCCCACCAGATCAACAACGGTTGATTTTCGCTGGCAAG 2722 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | |||||| | || || | | || |||||||| || ||||| || ||| ||||| Sbjct 2721 CAACTTGAGGATGGGCGTACTCTCGCTGACTATAATATCCAGAAAGAGTCTACTCTGCAT 2662 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 | || | ||| | || |||||||| Sbjct 2661 CTTGTACTCCGTCTGCGTGGTGGTAT 2636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754891891561600