Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq7505 102 1e-16 >seq7505 Length=7180 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || | |||||| | || | ||| | |||||||||||| || |||||||| | Sbjct 2061 TTCCTCCACGAAGTCTGAGGACGAGATGAAGAGTAGATTCTTTCTGAATGTTATAATCAG 2120 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||| | ||| || || ||||| || |||||||| | | ||| |||||||||| Sbjct 2121 CAAGAGTTCGACCATCTTCCAACTGTTTACCCGCAAAAATGAGCCGTTGTTGATCCGGAG 2180 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| || ||||| ||||| Sbjct 2181 GAATGCCCTCTTTGTCTTG 2199 Score = 93.3 bits (102), Expect = 6e-14 Identities = 91/115 (79%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 146074 ATGTAAAGTAGATT-CTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATT 146132 ||| |||||||||| |||| || || || ||||| | || || | || ||| |||| || Sbjct 2947 ATGCAAAGTAGATTCCTTTTGA-ATGTTGTAATCAGCTAGGGTACGGCCATCTTCTAGTT 3005 Query 146133 GTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||| |||||||| ||||||| |||||||| || ||||| ||||| || ||||| Sbjct 3006 GTTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCCTTGTCTTG 3060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742971199543040