Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7505 100 3e-16 seq12400 84.2 2e-11 seq195 84.2 2e-11 >seq7505 Length=7180 Score = 100 bits (110), Expect = 3e-16 Identities = 142/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGA-AACGGTCAAA 31273 |||| || || || |||||| | || ||||| | ||||||| |||| |||| | || Sbjct 2267 TGACCGGGAAGACTATCACCCTTGAAGTTGAGTCCTCCGACACCATCGATAACGTTAAAG 2208 Query 31274 CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGC 31333 | ||| | | |||| || ||| | || || || || || || || || || || || Sbjct 2207 CCAAGATTCAAG-ACAAAGAGGGCATTCCTCCGGATCAACAACGGCTCATTTTTGCGGGT 2149 Query 31334 AAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTT 31393 |||||||||||||| | ||| | |||||||||||||| |||||||| |||||| Sbjct 2148 AAACAGTTGGAAGATGGTCGAACTCTTGCTGATTATAACATTCAGAAAGAATCTACTCTT 2089 Query 31394 CATCTGGTACTTAGACT 31410 ||||| || || ||||| Sbjct 2088 CATCTCGTCCTCAGACT 2072 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAAC 31274 |||| || ||||| || || | || || ||| |||| |||| | || | || || Sbjct 1971 TGACCGGTAAAACCATTACTTTGGAAGTGGAATCGTCTGACACAATTGACAATGTGAAGG 1912 Query 31275 AGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCA 31334 | ||| |||||| || ||| | ||||| || ||||||||||| || |||||||| | Sbjct 1911 CTAAAATTCAGGACAAAGAGGGCATCCCGCCTGATCAGCAGCGTCTCATTTTCGCTGGTA 1852 Query 31335 AACAGTTGGAAGACTCTATGACTATGAGC-GATTATAACATTCAAAAAGAATCGACTCTT 31393 |||| | || || | || || || |||||||||||||||||||| || |||||| Sbjct 1851 AACAACTTGAGGA-TGGCCGAACATTGGCAGATTATAACATTCAAAAAGAGTCAACTCTT 1793 Query 31394 CATCTGGTACT 31404 ||||| || || Sbjct 1792 CATCTAGTTCT 1782 >seq12400 Length=4870 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/222 (70%), Gaps = 9/222 (4%) Strand=Plus/Minus Query 57582 TACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTG 57641 |||||| || ||||| ||||||||||| | |||||| | || || ||||| || || Sbjct 2192 TACAAACGCGCCGAAGCTTCGTTTTGGACGGCGGAAGAAATTGATCTATCTAAAGACATG 2133 Query 57642 AGCGATTGGGATTCCCTCAAA--GAAT-CTGA-GAGAA--ATTTTATTAAACACGTGTTG 57695 ||||||||| | ||| ||| | || ||||| |||| ||||| || || | Sbjct 2132 CACGATTGGGA---CAAAAAACTAAATGCGGACGAGAAACATTTCATTAAGCATGTTCTT 2076 Query 57696 GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA 57755 || || ||||| || || ||||| || || || |||||| | | || ||||| | Sbjct 2075 GCATTCTTCGCTGCCTCAGATGGCATCGTCAATGAGAATCTAATTGAGAGATTCAGCGGA 2016 Query 57756 GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAA 57797 ||||| ||| | |||| || | || |||||||| |||||| Sbjct 2015 GAAGTTCAAATTGCGGAAGCACGTTGTTTTTACGGCTTTCAA 1974 >seq195 Length=27450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 |||||||| || || || ||||| || || || | | |||||| || |||||||| || Sbjct 4140 TTGTCCACCGTGAATTGAATGGCATTGGCAGCAGCTCGGGTGCGTAGGTAATACATTCCA 4199 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAA 22209 ||||| || || ||||||||||||||||||| ||| | | ||| Sbjct 4200 GTCTTGAGTCCTTTCTTCCACGCGTAAAAATGCATCTAAGGCAA 4243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445433540657040