Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq12400 89.7 1e-12 >seq12400 Length=4870 Score = 89.7 bits (98), Expect = 1e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 101938 AGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTT 101997 |||| | || ||||| | |||| || |||||||||||| ||||||| | ||| | | Sbjct 1533 AGGAGTTTTTTTTAG--GATCATTTGCTTCCATTTTCTGGCTCAAGAAACGTGGTTTGAT 1476 Query 101998 GCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTT 102057 |||||| | || | ||||||||||| ||||| |||||||||| |||||| ||| || Sbjct 1475 GCCTGGATTGACGTTTTCCAATGAGTTGATTTCCCGGGACGAAGGGCTTCATACCGATTT 1416 Query 102058 TGCATG 102063 ||||| Sbjct 1415 CGCATG 1410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988826591888835