Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq195 93.3 4e-14 >seq195 Length=27450 Score = 93.3 bits (102), Expect = 4e-14 Identities = 290/443 (65%), Gaps = 12/443 (3%) Strand=Plus/Plus Query 37183 GTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATT 37242 || || ||||||| |||||||| | | |||||| || ||||| || ||||| Sbjct 4740 GTGTAAGGTTCAAAACACTCATTAAACCCAAGAATTTGACTAGTCGATGCCGTGGGCATA 4799 Query 37243 GGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCA--- 37299 || || | | ||| ||| || | |||| |||| || || |||||| |||| Sbjct 4800 GGAGCAAGCAAAAGAGAATTCCTAATTCCA-GTGTTTT---TCACTTTTTCT-TTCAAAC 4854 Query 37300 --TTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTT 37357 | ||| ||||| || || ||||| ||| |||||| ||| |||| || || |||| Sbjct 4855 TATCCCACTCCCACAATTCCGTTGGTTTCACGTTCCACATGTCAAATTGAAGGATGCCTT 4914 Query 37358 TACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAAC 37417 ||| || || || | | | ||||||||||| |||| | ||| | || Sbjct 4915 GACTTGCGGGTGAGCCTGGAAAAGTCTCATAAGGGCCGTCCCTGAGAGCCAACTCATTGG 4974 Query 37418 TAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTT 37477 || ||||| || |||| ||||| ||||| ||||| || ||||| | | | || |||| Sbjct 4975 AAGCCTCTAGAGCTGCATGATATAAAGTTTCAAAAATCTGAATATTGAGTCTCTTGGCTT 5034 Query 37478 CTTCGCTATCGAATGCATAGCCCAATAATAT-AAACACATCAGCCAAACCCTGAACACCG 37536 | ||| || | | ||| | ||| | ||| ||||||| | || ||||| || Sbjct 5035 CAAGCGAATCAAACGGA-AGCTTCAAAATCTGAAATGCATCAGCTAGCCCTTGAACCCCA 5093 Query 37537 ATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTG 37596 || || || || | ||| || | || ||| | | || |||||| |||||||| Sbjct 5094 ATGCCAATCGGGCGGTGTCTCATGTTCGATTTTTTTGCCTCCGGCACTGGGTAATAATTT 5153 Query 37597 ATATCTATTATTTTATTTAGATT 37619 ||||| || ||||| || | ||| Sbjct 5154 ATATCAATGATTTTGTTCAAATT 5176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468174946675280