Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq195 104 3e-17 seq12400 87.8 2e-12 >seq195 Length=27450 Score = 104 bits (114), Expect = 3e-17 Identities = 139/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 66772 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGAT 66831 |||||||| ||| ||| || || |||| ||||| || || ||||||||||| || |||| Sbjct 6645 CATAGTTGTATAGATCTTCAATAACTTGGCTAAAGAGCTTCTTTGTTTCTTTATGAAGAT 6704 Query 66832 TTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT-G 66890 | | ||||| || ||||||| | |||||||||||||| | || || || || Sbjct 6705 TGCTAATTGCTATCCTTGCGGCTAGGACAGCATAATCCGGATGACGCGTTGT-CATGTAA 6763 Query 66891 GCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCT 66950 ||||| | ||||| || ||| |||| | ||| || || || || ||||| ||| || Sbjct 6764 GCTGCAGTCTCGGCGGCTAGATTGTCGAGTTCGACAGTAGTAACCCCATTGAATACCCCA 6823 Query 66951 TGGATAACCTT 66961 | |||||| || Sbjct 6824 TTGATAACTTT 6834 >seq12400 Length=4870 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| | ||||||||||||| || || || ||||| | ||| || || |||||| Sbjct 1401 AACAAAAGACATGCGAAATCGGTATGAAGCCCTTCGTCCCGGGAAATCAACTCATTGGAA 1460 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 ||||| | ||| ||||| | ||||| || || ||||| || ||||| ||||||||||| Sbjct 1461 AACGTCAATCCAGGCATCAAACCACGTTTCTTGAGCCAGAAAATGGAAGCAAATGATCC- 1519 Query 36269 GAAAAGAAAATTCCT 36283 ||| |||| |||| Sbjct 1520 -TAAAAAAAACTCCT 1533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657681334143080