Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq7505 87.8 2e-12 >seq7505 Length=7180 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| || | || | || | ||| || ||||||||||| || ||||| ||||| Sbjct 2061 TTCCTCCACGAAGTCTGAGGACGAGATGAAGAGTAGATTCTTTCTGAATGTTATAATCAG 2120 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | | |||| | ||||||||| ||||| |||||| |||| |||| |||||||| | Sbjct 2121 CAAGAGTTCGACCATCTTCCAACTGTTTACCCGCAAAAATGAGCCGTTGTTGATCCGGAG 2180 Query 20100 GCACGCCTTCTTTGTC 20115 | | ||| |||||||| Sbjct 2181 GAATGCCCTCTTTGTC 2196 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| || || || |||||||| ||||| ||||| ||| ||| ||| || | ||| Sbjct 1790 ATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGCCAATGTTCGGCCATCCTCAAGTTG 1849 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATC-GACGGGCACGCCTTCTTTGTCGGCAATTT 20123 ||| || || |||| || | ||| ||||| | |||| | ||| |||||||| ||||| Sbjct 1850 TTTACCAGCGAAAATGAGACGCTGCTGATCAGGCGGG-ATGCCCTCTTTGTCCTGAATTT 1908 Query 20124 TTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGG 20183 | ||||| | | ||| | || | |||| ||||| ||||||||||| |||| Sbjct 1909 TAGCCTTCACATTGTCAATTGTGTCAGACGATTCCACTTCCAAAGTAATGGTTTTACCGG 1968 Query 20184 TCAACGTTTTGACAAAA 20200 |||| | |||| |||| Sbjct 1969 TCAAGCTGTTGAGAAAA 1985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419281721768097