Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq7505 147 5e-30 >seq7505 Length=7180 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || || || || ||||| | ||||||||||||||||| ||||| ||| Sbjct 2060 ATTCCTCCACGAAGTCTGAGGACGAGATGAAGAGTAGATTCTTTCTGAATGTTATAATCA 2119 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||| ||| ||||| | ||||| || |||||||| |||| |||||||| ||| Sbjct 2120 GCAAGAGTTCGACCATCTTCCAACTGTTTACCCGCAAAAATGAGCCGTTGTTGATCCGGA 2179 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| || |||||||| ||||| || || || | ||| ||| | || Sbjct 2180 GGAATGCCCTCTTTGTCTTGAATCTTGGCTTTAACGTTATCGATGGTGTCGGAGGACTCA 2239 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 || || || || |||||||| || || Sbjct 2240 ACTTCAAGGGTGATAGTCTTCCCGGT 2265 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 ||||| ||||| | ||||| |||||||| ||||||||||||| ||||| | || || Sbjct 2654 AGTACAAGATGCAGAGTAGACTCTTTCTGGATATTATAGTCAGCGAGAGTACGCCCATCC 2713 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| || ||||| ||||| | || |||||||| || || || ||||| ||||| Sbjct 2714 TCAAGTTGCTTGCCAGCGAAAATCAACCGTTGTTGATCTGGTGGGATGCCTTCCTTATCT 2773 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || ||||| || || | ||| ||| | ||||||||| | ||||| ||| Sbjct 2774 TGAATCTTGGCCTTTACGTTATCGATGGTGTCGGAGGATTCTACCTCCAAAGTAATGGTC 2833 Query 104528 TTACCAGT 104535 || ||||| Sbjct 2834 TTTCCAGT 2841 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || ||||| || |||||||| || ||||| || || ||| Sbjct 2921 ATGCCTCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCA 2980 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||| || | || |||||||||||||| |||||||| || | | ||| ||||| || Sbjct 2981 GCTAGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGGT 3040 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || || |||||||| || ||||| || | |||||| | ||| Sbjct 3041 GGAATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTCA 3100 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| |||||||||||||| || || Sbjct 3101 ACCTCGAGTGTAATAGTCTTGCCGGT 3126 Score = 118 bits (130), Expect = 2e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| || || ||||| ||||| || || || || | || || | ||||||||| Sbjct 2369 ACGAGATGCAAGGTGGATTCCTTCTGGATGTTGTAATCTGCGAGGGTGCGACCGTCTTCA 2428 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || || ||||| |||| | ||||| ||||| || || ||||| || || ||| Sbjct 2429 AGTTGCTTACCGGCAAAGATTAATCGTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 2488 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| ||||||||||| || | || || | ||| ||||| || || || ||||| Sbjct 2489 ATCTTGGCTTTTACATTATCAATTGTGTCAGACGATTCGACCTCAAGCGTTATTGTCTTC 2548 Query 104531 CCAGTAAG 104538 ||||| || Sbjct 2549 CCAGTCAG 2556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150517142332796