Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq7505 86.0 5e-12 >seq7505 Length=7180 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 |||| |||||| || ||| ||||||||||| ||||| |||||| ||| | ||||| Sbjct 1785 ACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGCCAATGTTCGGCCATCCTCA 1844 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 || || ||||| || |||| | |||||||||||| ||| | | || |||||| | Sbjct 1845 AGTTGTTTACCAGCGAAAATGAGACGCTGCTGATCAGGCGGGATGCCCTCTTTGTCCTGA 1904 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 ||||| ||| | | | || || || | || ||| || | || ||||||||| Sbjct 1905 ATTTTAGCCTTCACATTGTCAATTGTGTCAGACGATTCCACTTCCAAAGTAATGGTTTTA 1964 Query 48698 CCGGT 48702 ||||| Sbjct 1965 CCGGT 1969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420944510301737