Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq5697 96.9 6e-15 >seq5697 Length=8516 Score = 96.9 bits (106), Expect = 6e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 194048 TCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGA 194107 ||| |||||||| ||||| || ||| | |||||||||||||| || ||||||||||| Sbjct 5189 TCTCTATCTTGGCAATCTGTCCGCCAAGCGTGATTGGGGACACGCTAAAGATTATGTTGA 5130 Query 194108 AGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGA 194167 || |||||| |||||| || || | ||||| ||||| | || ||||||| || || Sbjct 5129 AGGAATGTGGAAAATGTTACAGCAAAACGAACCAGATGACTTCGTTCTTGCTACCGGAGA 5070 Query 194168 ACAGTATTCTGTTAGAGA 194185 | |||| || ||||| Sbjct 5069 AACTCATTCAGTAAGAGA 5052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 806952188437720