Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq7505 98.7 9e-16 >seq7505 Length=7180 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| | ||||| ||| || |||||||||||| | || ||| |||||| ||| Sbjct 2253 ATCACCCTTGAAGTTGAGTCCTCCGACACCATCGATAACGTTAAAGCCAAGATTCAAGAC 2194 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 ||||| ||||| ||||| |||||||| | || |||| | || || || | |||||| Sbjct 2193 AAAGAGGGCATTCCTCCGGATCAACAACGGCTCATTTTTGCGGGTAAACAGTTGGAAGAT 2134 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206 | ||| | |||||||||||||| ||||||||||| ||||| | || | ||| Sbjct 2133 GGTCGAACTCTTGCTGATTATAACATTCAGAAAGAATCTACTCTTCATCTCGTCCTCAGA 2074 Query 24207 TTGAGAGGAGGA 24218 | | |||||| Sbjct 2073 CTTCGTGGAGGA 2062 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 24012 TTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAA 24071 || |||||||| | || || | || || ||| | |||||||||||| | ||||| Sbjct 3415 TTGACTGGAAAGACTATCACTTTGGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAG 3356 Query 24072 CAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGC 24131 ||||| |||||||||||||| ||||| || || || | || |||| || || Sbjct 3355 GCTAAGATCCAAGACAAAGAAGGCATTCCTCCGGACCAGCAACGGCTAATTTTCGCTGGA 3296 Query 24132 AAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAAT 24190 ||||||||||| |||| | | || | ||| ||||| |||||||| || ||||| || | Sbjct 3295 AAGCAACTCGAGGATGGCCG-CACCTTAGCGGATTACAACATTCAGAAGGAATCGACCTT 3237 Query 24191 TCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| | || || | ||| |||| || Sbjct 3236 GCATCTGGTACTACGCTTGCGAGGTGG 3210 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 24012 TTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAA 24071 ||||| || || | ||||| |||| || || || ||| || || || | ||||| Sbjct 3129 TTAACCGGCAAGACTATTACACTCGAGGTTGAATCCTCCGATACGATTGATAATGTCAAG 3070 Query 24072 CAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGC 24131 |||||| ||||| ||||| || || || ||||| ||| || |||| | | || Sbjct 3069 GCAAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAGCAGCGATTGATCTTTGCTGGT 3010 Query 24132 AAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAAT 24190 || ||||| ||||||| | | | | | ||| ||||| ||||||||||| |||||||| | Sbjct 3009 AAACAACTAGAAGATGGCCGTACCCT-AGCTGATTACAACATTCAAAAGGAATCTACTTT 2951 Query 24191 TCATTTAGTG 24200 ||| | ||| Sbjct 2950 GCATCTCGTG 2941 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 |||||||| ||||| || || ||||| ||| | || |||| || || || ||||| || Sbjct 1900 GACAAAGAGGGCATCCCGCCTGATCAGCAGCGTCTCATTTTCGCTGGTAAACAACTTGAG 1841 Query 24144 GATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||| | ||| | | || |||||||||||||||||||| || || ||||| |||| Sbjct 1840 GATGGCCGAA-CATTGGCAGATTATAACATTCAAAAAGAGTCAACTCTTCATCTAGT 1785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429622987379235