Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq7505 96.9 3e-15 >seq7505 Length=7180 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353 |||| |||| | | || || ||||||||||| | ||| ||| || ||||| | Sbjct 1985 TTTTCTCAACAGCTTGACCGGTAAAACCATTACTTTGGAAGTGGAATCGTCTGACACAAT 1926 Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412 || |||| || || |||||| || ||||| ||| |||| ||||||||| | | Sbjct 1925 TG-ACAATGTGAAGGCTAAAATTCAGGACAAAGAGGGCATCCCGCCTGATCAGCAGCGTC 1867 Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472 | |||| || || |||||| | || |||| | ||| |||| |||||||||||||||| Sbjct 1866 TCATTTTCGCTGGTAAACAACTTGAGGATGGCCGAACATTGGCAGATTATAACATTCAAA 1807 Query 115473 AAGAGTCTACTATACAT 115489 ||||||| ||| | ||| Sbjct 1806 AAGAGTCAACTCTTCAT 1790 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 115310 ACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAA 115369 || || || || || ||| | ||| |||||| |||||| | | | || ||| Sbjct 2265 ACCGGGAAGACTATCACCCTTGAAGTTGAGTCCTCCGACACCATCGATAACGTTAAAGCC 2206 Query 115370 AAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAA 115429 || ||| || ||||| ||| | || ||||| ||| | || |||| |||||| ||| Sbjct 2205 AAGATTCAAGACAAAGAGGGCATTCCTCCGGATCAACAACGGCTCATTTTTGCGGGTAAA 2146 Query 115430 CAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACAT 115489 || || ||||||| ||| | || |||||||||||||| ||||| |||||| | ||| Sbjct 2145 CAGTTGGAAGATGGTCGAACTCTTGCTGATTATAACATTCAGAAAGAATCTACTCTTCAT 2086 Query 115490 ATGGTGTTGAGATTGCGAGGAGGAA 115514 | || | ||| | || ||||||| Sbjct 2085 CTCGTCCTCAGACTTCGTGGAGGAA 2061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425034330560440