Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3628 104 2e-17 seq16992 82.4 5e-11 >seq3628 Length=10935 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| ||||||||||||||||||||| |||||||||||| | Sbjct 9791 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCTC 9732 Query 20007 GGTAATATTTAGCCTTA 20023 |||||||||||||| Sbjct 9731 ATCAATATTTAGCCTTA 9715 >seq16992 Length=3647 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | |||||||||||| |||||||| ||||||||| || ||||| |||| | Sbjct 2417 CCACCACGAAGACGCAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGCC 2358 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATAT 38188 ||| ||| |||| || | ||||||||||||| ||| Sbjct 2357 AAAGTACGACCGTCCTCAAGCTGTTTTCCGGCAACTAT 2320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334703343470447