Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq195 107 2e-18 seq12400 87.8 2e-12 >seq195 Length=27450 Score = 107 bits (118), Expect = 2e-18 Identities = 140/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 63783 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGAT 63842 |||||||| ||| ||| || || |||| ||||| || || ||||||||||| || |||| Sbjct 6645 CATAGTTGTATAGATCTTCAATAACTTGGCTAAAGAGCTTCTTTGTTTCTTTATGAAGAT 6704 Query 63843 TTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-G 63901 | | ||||| || |||||||| | |||||||||||||| | || || || || Sbjct 6705 TGCTAATTGCTATCCTTGCGGCTAGGACAGCATAATCCGGATGACGCGTTGT-CATGTAA 6763 Query 63902 GCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCT 63961 ||||| | ||||| || ||| |||| | ||| || || || || ||||| ||| || Sbjct 6764 GCTGCAGTCTCGGCGGCTAGATTGTCGAGTTCGACAGTAGTAACCCCATTGAATACCCCA 6823 Query 63962 TGGATAACCTT 63972 | |||||| || Sbjct 6824 TTGATAACTTT 6834 >seq12400 Length=4870 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| | ||||||||||||| || || || ||||| | ||| || || |||||| Sbjct 1401 AACAAAAGACATGCGAAATCGGTATGAAGCCCTTCGTCCCGGGAAATCAACTCATTGGAA 1460 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 ||||| | ||| ||||| | ||||| || || ||||| || ||||| ||||||||||| Sbjct 1461 AACGTCAATCCAGGCATCAAACCACGTTTCTTGAGCCAGAAAATGGAAGCAAATGATCC- 1519 Query 32772 GAAAAGAAAATTCCT 32786 ||| |||| |||| Sbjct 1520 -TAAAAAAAACTCCT 1533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633158859065200