Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7505 125 6e-24 >seq7505 Length=7180 Score = 125 bits (138), Expect = 6e-24 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 25020 TTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG 25079 |||||||||||| |||| || | |||||||| ||||||||||| || || ||||| Sbjct 1972 TTGACCGGTAAAACCATTACTTTGGAAGTGGAATCGTCTGACACAATTGACAATGTGAAG 1913 Query 25080 -CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGG 25138 | |||| ||| |||||||| || || || ||||| || ||||| | ||||| || || Sbjct 1912 GCTAAAATTCAG-GACAAAGAGGGCATCCCGCCTGATCAGCAGCGTCTCATTTTCGCTGG 1854 Query 25139 CAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCT 25198 |||||| | || |||| || || ||| ||||| || ||||||||||| || || || Sbjct 1853 TAAACAACTTGAGGATGGCCGAACATTGGCAGATTATAACATTCAAAAAGAGTCAACTCT 1794 Query 25199 ACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 ||| |||| || | || | |||||| Sbjct 1793 TCATCTAGTTCTCCGTCTCCGTGGAGGA 1766 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/178 (73%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG---A 25077 |||| || || | || || | || || || ||||||||||| || || | || | Sbjct 2555 TGACTGGGAAGACAATAACGCTTGAGGTCGAATCGTCTGACACAATTGAT--AATGTAAA 2498 Query 25078 AGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCG 25137 ||| || | ||| ||||| ||||| ||||||||||||||||| || | || ||||||| Sbjct 2497 AGCCAAGATTCAA-GACAAGGAAGGTATTCCACCTGACCAACAACGATTAATCTTTGCCG 2439 Query 25138 GCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCAC 25195 | || ||| | ||||| | |||||| | | |||||||| || || || |||||||| Sbjct 2438 GTAAGCAACTTGAAGACGGTCGCACCCTCGCAGATTACAACATCCAGAAGGAATCCAC 2381 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 25020 TTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--A 25077 ||||| || || | ||||| | || || ||||| || ||||| ||||| || || | Sbjct 3415 TTGACTGGAAAGACTATCACTTTGGAGGTTGAGTCTTCCGACACCATCGA--CAATGTCA 3358 Query 25078 AGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCG 25137 || || ||| ||||||||||| ||||| || ||||| || ||| | ||||| || | Sbjct 3357 AGGCTAAGATCCAAGACAAAGAAGGCATTCCTCCGGACCAGCAACGGCTAATTTTCGCTG 3298 Query 25138 GCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGC 25197 | || ||| | || |||| ||||| | | |||||||| ||||| || ||||| || Sbjct 3297 GAAAGCAACTCGAGGATGGCCGCACCTTAGCGGATTACAACATTCAGAAGGAATCGACCT 3238 Query 25198 TACATTTAGTGCTA 25211 | ||| | || ||| Sbjct 3237 TGCATCTGGTACTA 3224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433012517851655