Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq12400 123 3e-23 >seq12400 Length=4870 Score = 123 bits (136), Expect = 3e-23 Identities = 161/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 |||||| || ||||| ||||| | ||||||| || || |||||| |||||||| Sbjct 1971 AATTTGAAAGCCGTAAAAACAACGTGCTTCCGCAATTTGAACTTCTCCGCTGAATCTCTC 2030 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 | ||||| |||||||| || ||||| || || || || || || | | |||||| || Sbjct 2031 AATTAGATTCTCATTGACGATGCCATCTGAGGCAGCGAAGAATGCAAGAACATGCTTAAT 2090 Query 93535 AAAATGTTTCTCATCATCTTTAAG---CTTATCCCAATCGGATAGATCTTTTGAAAGATC 93591 ||||||||||| || | || || || ||||||||| | ||||| || ||||| Sbjct 2091 GAAATGTTTCTCGTCCGCATTTAGTTTTTTGTCCCAATCGTGCATGTCTTTAGATAGATC 2150 Query 93592 GACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633 | |||||| | ||||||||||| ||||| || |||||| Sbjct 2151 AATTTCTTCCGCCGTCCAAAACGAAGCTTCGGCGCGTTTGTA 2192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556444985079880