Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq7505 96.9 3e-15 >seq7505 Length=7180 Score = 96.9 bits (106), Expect = 3e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 |||||||| ||| |||| ||||||||| |||| |||| |||||| ||||| |||||| Sbjct 2196 GACAAAGAGGGCATTCCTCCGGATCAACAACGGCTCATTTTTGCGGGTAAACAGTTGGAA 2137 Query 111340 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACAT 111390 ||| | |||| | || |||||||| || || ||||||||||| || ||| Sbjct 2136 GATGGTCGAACTCTTGCTGATTATAACATTCAGAAAGAATCTACTCTTCAT 2086 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 111195 TTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGT 111254 |||| |||| | ||||||| ||||||||||| ||||| |||| | || | | Sbjct 1985 TTTTCTCAACAGCTTGACCGGTAAAACCATTACTTTGGAAGTGGAATCGTCTGACACAAT 1926 Query 111255 TGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATCAACAAAGGC 111313 || | | || || |||||| |||||||| ||| ||||| | ||||| || | | Sbjct 1925 TGACAATGTGAAGGCTAAAATTCAGGACAAAGAGGGC-ATCCCGCCTGATCAGCAGCGTC 1867 Query 111314 TTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAA 111373 | |||| || || |||||| | || ||| ||| |||| |||||||| || |||| Sbjct 1866 TCATTTTCGCTGGTAAACAACTTGAGGATGGCCGAACATTGGCAGATTATAACATTCAAA 1807 Query 111374 AAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 |||| || || || ||| |||| | ||||| || || || Sbjct 1806 AAGAGTCAACTCTTCATCTAGTTCTCCGTCTCCGTGGAGG 1767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422732007975400