Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq7505 84.2 2e-11 >seq7505 Length=7180 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 21855 TTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCAGAAACGGTGGCCGATCTTAAG 21914 ||||| ||||| || ||||| | || ||| || | || ||| | | || | ||| Sbjct 3129 TTAACCGGCAAGACTATTACACTCGAGGTTGAATCCTCCGATACGATTGATAATGTCAAG 3070 Query 21915 CAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGC 21974 ||| || || || || ||| | || | | || ||| || | ||||||||||| Sbjct 3069 GCAAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAGCAGCGATTGATCTTTGCTGGT 3010 Query 21975 AAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTT 22034 ||||||||||||||| || | || |||||||| ||||| |||||||||||| | Sbjct 3009 AAACAACTAGAAGATGGCCGTACCCTAGCTGATTACAACATTCAAAAGGAATCTACTTTG 2950 Query 22035 CATATGGTATTACGTTTACGAGGAGG 22060 ||| | || | ||| |||| ||||| Sbjct 2949 CATCTCGTGCTCCGTCTACGTGGAGG 2924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357864069141898