Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq7505 123 2e-23 >seq7505 Length=7180 Score = 123 bits (136), Expect = 2e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| ||||| | || | ||| | ||||||||||| |||||||| ||||| Sbjct 2060 ATTCCTCCACGAAGTCTGAGGACGAGATGAAGAGTAGATTCTTTCTGAATGTTATAATCA 2119 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| |||||| | |||||||| || | ||||| || ||||| |||||| Sbjct 2120 GCAAGAGTTCGACCATCTTCCAACTGTTTACCCGCAAAAATGAGCCGTTGTTGATCCGGA 2179 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| |||||||| |||||| ||| | | || | |||||||| ||| || Sbjct 2180 GGAATGCCCTCTTTGTCTTGAATCTTGGCTTTAACGTTATCGATGGTGTCGGAGGACTCA 2239 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || || | ||| | || || ||||||| Sbjct 2240 ACTTCAAGGGTGATAGTCTTCCCGGTCA 2267 Score = 118 bits (130), Expect = 9e-22 Identities = 160/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 114139 ATTACCATTTACAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTT 114198 ||| | |||||||| || ||||| || | | ||||| ||| | || || ||||||| Sbjct 1752 ATTTCAATTTACAAT--CCTCCACGGAGACGGAGAACTAGATGAAGAGTTGACTCTTTTT 1809 Query 114199 GAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGAC 114258 ||||||| ||||| || || || ||| |||||||||||||||||| | ||||||| Sbjct 1810 GAATGTTATAATCTGCCAATGTTCGGCCATCCTCAAGTTGTTTACCAGCGAAAATGAGAC 1869 Query 114259 GCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGG 114318 |||| || || || || ||||| |||||||| ||| || || | | |||| | Sbjct 1870 GCTGCTGATCAGGCGGGATGCCCTCTTTGTCCTGAATTTTAGCCTTCACATTGTCAATTG 1929 Query 114319 TGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCA 114360 |||| | ||||| || |||| || | ||||| ||||||| Sbjct 1930 TGTCAGACGATTCCACTTCCAAAGTAATGGTTTTACCGGTCA 1971 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211 || || |||||||| | | || | ||| | |||||||| ||||||||||||||||| Sbjct 2921 ATGCCTCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCA 2980 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 ||| | ||||| |||||| |||||||||||||| |||| | ||||| || || || Sbjct 2981 GCT-AGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGG 3039 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||||| ||||| ||||| |||||| || | | |||| || |||| |||||| Sbjct 3040 TGGAATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTC 3099 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | || | || |||||||| Sbjct 3100 AACCTCGAGTGTAATAGTCTTGCCGGT 3126 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | ||| || | ||| | || ||||| || || ||||||||||| Sbjct 2348 ATACCTCCGCGCAGACGCAAGACGAGATGCAAGGTGGATTCCTTCTGGATGTTGTAATCT 2407 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||||||||||| ||||| || |||| | || |||||||| || Sbjct 2408 GCGAGGGTGCGACCGTCTTCAAGTTGCTTACCGGCAAAGATTAATCGTTGTTGGTCAGGT 2467 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||| ||||| | |||| ||||| | |||||| Sbjct 2468 GGAATACCTTCCTTGTCTTGAATCTTGGCTTTTACATTATCAATTGTGTCAGACGATTCG 2527 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGA 114362 || || | || | || || || |||||| Sbjct 2528 ACCTCAAGCGTTATTGTCTTCCCAGTCAGA 2557 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAAT-CGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 || ||||| || ||||||||||||| |||| | || || ||| || ||||| || || Sbjct 3240 GTCGATTCCTTCTGAATGTTGTAATCCGCT-AAGGTGCGGCCATCCTCGAGTTGCTTTCC 3298 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 |||| | || || || || |||||||||||||||||||||||||| ||||| || Sbjct 3299 AGCGAAAATTAGCCGTTGCTGGTCCGGAGGAATGCCTTCTTTGTCTTGGATCTTAGCCTT 3358 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCA 114360 | | || | |||||||| || || || |||| || | || || || |||| Sbjct 3359 GACATTGTCGATGGTGTCGGAAGACTCAACCTCCAAAGTGATAGTCTTTCCAGTCA 3414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419828523382044