Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq195 107 2e-18 >seq195 Length=27450 Score = 107 bits (118), Expect = 2e-18 Identities = 315/481 (65%), Gaps = 12/481 (2%) Strand=Plus/Plus Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162 |||||| ||||| || ||||| ||||| || || || || ||| ||||| || || Sbjct 4889 CCACATGTCAAATTGAAGGATGCCTTGACTTGCGGGTGAGCCTGGAAAAGTCTCATAAGG 4948 Query 114163 GCCCTCAACCTCCG--CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 114220 ||| || ||| | |||| || | ||||| || ||||| ||||| | || ||| Sbjct 4949 GCCGTC--CCTGAGAGCCAACTCATTGGAAGCCTCTAGAGCTGCATGATATAAAGTTTCA 5006 Query 114221 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAAT- 114279 ||||| || ||| | | |||||| || |||||||||| || | || || | Sbjct 5007 AAAATCTGAATATTGAGTCTCTTGGCTTCAAGCGAATCAAACGGAAG-CTTCAAAATCTG 5065 Query 114280 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 114339 |||| |||| || || ||||| || || | |||||| ||||| |||||||| || || || Sbjct 5066 AAATGCATCAGCTAGCCCTTGAACCCCAATGCCAATCGGGCGGTGTCTCATGTTCGATTT 5125 Query 114340 TCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 114399 | || | ||| || ||| |||| |||| || | | || | ||| | ||| || Sbjct 5126 TTTTGCCTCCGGCACTGGGTAATAATTTATATCAATGATTTTGTTCAAATTGTGGGTAAC 5185 Query 114400 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATA 114459 |||| || | ||||| || |||| | | || | | | | | | || ||| Sbjct 5186 TTCCTTGGTAACATCATGGAGTTTTTGGAAGTCGTAGTTTCCATCCAC------GATATA 5239 Query 114460 CTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTC 114519 | || ||||| || || |||| ||||| || | ||||| ||| ||||| Sbjct 5240 TGTCGGTAGGGCAATAGATGCCAAGTTACAAACTGCCACTTCATCAGGCGCAGAATACTC 5299 Query 114520 TATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 114579 ||||||||||| || | ||| || || || || || | ||| || || || || || Sbjct 5300 GATAATTTCCGTGCAAAGATTGGAGGATTTGATAGTTCCAAGGTTTTTCTGGTTCGATTT 5359 Query 114580 T 114580 | Sbjct 5360 T 5360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596907548599960