Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq7505 100 3e-16 >seq7505 Length=7180 Score = 100 bits (110), Expect = 3e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | || ||| | ||| | |||||| || ||||||||||| ||||||||||| Sbjct 2924 CCTCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCAGCT 2983 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || ||||| || |||||||| || || | ||||||||| || | ||| Sbjct 2984 AGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGA 3043 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | |||||||| ||| ||| |||| | | | ||| ||| ||||| || Sbjct 3044 ATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTCAACC 3103 Query 42162 TCGACCGTGATGGTTTTGCCCGTTA 42186 |||| || || || ||||| |||| Sbjct 3104 TCGAGTGTAATAGTCTTGCCGGTTA 3128 Score = 82.4 bits (90), Expect = 8e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| |||||||| || ||||| |||| || || | || || || || ||||||||||| Sbjct 1802 CTCTTTTTGAATGTTATAATCTGCCAATGTTCGGCCATCCTCAAGTTGTTTACCAGCGAA 1861 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| |||||||| || | || | || ||| |||||| ||| |||| | || | Sbjct 1862 AATGAGACGCTGCTGATCAGGCGGGATGCCCTCTTTGTCC-TGAATTTTAGCCTTCACAT 1920 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | | ||||| ||||||||| || | || |||||||| || || Sbjct 1921 TGTCAATTGTGTCAGACGATTCCACTTCCAAAGTAATGGTTTTACCGGT 1969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542807176212080