Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq7505 116 4e-21 >seq7505 Length=7180 Score = 116 bits (128), Expect = 4e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || ||||| | || || ||||| | |||||||| || |||||||||||||| || Sbjct 3209 ACCACCTCGCAAGCGTAGTACCAGATGCAAGGTCGATTCCTTCTGAATGTTGTAATCCGC 3268 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || || ||||| || || |||| ||||| |||||||| ||||| Sbjct 3269 TAAGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAAATTAGCCGTTGCTGGTCCGGAGG 3328 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| |||||||| ||||| || || Sbjct 3329 AATGCCTTCTTTGTCTTGGATCTT 3352 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||||||||| || || |||||||||||||| |||||||| | || || | || Sbjct 1782 AGAACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGCCAATGTTCGGCCATCC 1841 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| || || || || ||||||| |||||||| || || || || || ||||| || Sbjct 1842 TCAAGTTGTTTACCAGCGAAAATGAGACGCTGCTGATCAGGCGGGATGCCCTCTTTGTCC 1901 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| ||| || | ||| ||| | |||||||| | ||| | ||| Sbjct 1902 TGAATTTTAGCCTTCACATTGTCAATTGTGTCAGACGATTCCACTTCCAAAGTAATGGTT 1961 Query 64412 TTGCCGGTCAA 64422 || |||||||| Sbjct 1962 TTACCGGTCAA 1972 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | | || ||||| | || ||||| || || |||||||||||||| Sbjct 2350 ACCTCCGCGCAGACGCAAGACGAGATGCAAGGTGGATTCCTTCTGGATGTTGTAATCTGC 2409 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||||||||| ||||| |||||| | || | || || ||||| || || Sbjct 2410 GAGGGTGCGACCGTCTTCAAGTTGCTTACCGGCAAAGATTAATCGTTGTTGGTCAGGTGG 2469 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || |||||| || | ||| ||| | || || Sbjct 2470 AATACCTTCCTTGTCTTGAATCTTGGCTTTTACATTATCAATTGTGTCAGACGATTCGAC 2529 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCA 64421 || | |||| ||||| || |||| Sbjct 2530 CTCAAGCGTTATTGTCTTCCCAGTCA 2555 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||| | || ||||| ||||||||||||||||| || | ||| || | ||| Sbjct 2939 AGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCAGCTAGGGTACGGCCATCT 2998 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || || || ||| | || | |||||||| || || ||||| ||||| || ||| Sbjct 2999 TCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCCTTGTCT 3058 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| ||| || | ||||| || || || || | || | ||| Sbjct 3059 TGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTCAACCTCGAGTGTAATAGTC 3118 Query 64412 TTGCCGGTCAA 64422 |||||||| || Sbjct 3119 TTGCCGGTTAA 3129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499271708982280