Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7505 93.3 4e-14 >seq7505 Length=7180 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || |||||||| || | || | ||| | | | || ||||| ||||||||||| || ||| Sbjct 3210 CCACCTCGCAAGCGTAGTACCAGATGCAAGGTCGATTCCTTCTGAATGTTGTAATCCGCT 3269 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||||||||| || || | | ||||| || || ||||||||||| Sbjct 3270 AAG-GTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAAATTAGCCGTTGCTGGTCCGGAGG 3328 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| ||| || || | |||| || | |||||||| ||||| | Sbjct 3329 AATGCCTTCTTTGTCTTGGATCTTAGCCTTGACATTG-TCGATGGTGTCGGAAGACTCAA 3387 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCA 138592 |||| | || | || || ||||||| Sbjct 3388 CCTCCAAAGTGATAGTCTTTCCAGTCA 3414 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||||| ||| | ||||||| ||||||||||| || || | Sbjct 1767 CCTCCACGGAGACGGAGAACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGCC 1826 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| ||||||||||| | | || |||||||| || || || || Sbjct 1827 AATGTTCGGCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGCTGCTGATCAGGCGGG 1886 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || |||||||| ||| |||| | || |||| || | ||||| | ||| |||| Sbjct 1887 ATGCCCTCTTTGTC-CTGAATTTTAGCCTTCACATTG-TCAATTGTGTCAGACGATTCCA 1944 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCA 138592 | || | || | |||||||| |||| Sbjct 1945 CTTCCAAAGTAATGGTTTTACCGGTCA 1971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495891834662640