Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq7505 93.3 4e-14 >seq7505 Length=7180 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| || | ||| | ||| | ||||| || |||||||| |||||||| | Sbjct 2924 CCTCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCAGCT 2983 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| ||||| ||||| ||||| ||||||||||||||||||| || || Sbjct 2984 AGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGA 3043 Query 127007 ATGCCCTCCTTGTC 127020 || || |||||||| Sbjct 3044 ATACCTTCCTTGTC 3057 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/113 (77%), Gaps = 1/113 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||||||||| || ||||| ||| || || ||| || || ||||| ||| Sbjct 1797 GTTGACTCTTTTTGAATGTTATAATCTGCCAATGTTCGGCCATCCTCAAGTTGTTTACCA 1856 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT 127029 ||| | || | ||||||||||| || || |||||||| |||||| ||| ||| Sbjct 1857 GCGAAAATGAGACGCTGCTGATCAGGCGGGATGCCCTCTTTGTCC-TGAATTT 1908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475145737608880