Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq7505 100 3e-16 >seq7505 Length=7180 Score = 100 bits (110), Expect = 3e-16 Identities = 149/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169 || ||||| || || | | ||| ||||||| || ||||||||||| || || ||||| Sbjct 2921 ATGCCTCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCA 2980 Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 ||| | ||| ||| || | |||||| || || | |||||||| ||||| || || Sbjct 2981 GCT-AGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGG 3039 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || ||||| || ||| |||| || | || ||||| || || Sbjct 3040 TGGAATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTC 3099 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTA 45318 || ||||| |||| || |||||||||| Sbjct 3100 AACCTCGAGTGTAATAGTCTTGCCGGTTA 3128 Score = 95.1 bits (104), Expect = 1e-14 Identities = 125/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGAATCGTC 45190 || ||||||| || |||||||| || || || ||||| ||| | ||| ||| || Sbjct 3228 ACCAGATGCAAGGTCGATTCCTTCTGAATGTTGTAATCCGCTAA-GGTGCGGCCATCCTC 3286 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | ||| ||||| ||| | || | |||||||||||||| |||||||||||||| ||||| Sbjct 3287 GAGTTGCTTTCCAGCGAAAATTAGCCGTTGCTGGTCCGGAGGAATGCCTTCTTTGTCTTG 3346 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 || || |||| || | ||||||||||||||| || || | ||| Sbjct 3347 GATCTTAGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCCAAAGT 3397 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | ||| || || |||| || || ||||||||||| || || || Sbjct 3495 ATACCACCGCGAAGACGCAAGACGAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCT 3554 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | ||| || || || | ||||| ||||||||||| || Sbjct 3555 GCAAGGGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGA 3614 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| || |||||||| || || | || | || | |||||| || ||||| Sbjct 3615 GGGATACCTTCCTTGTCTTGAATCTTGGCCTTCA-CGTTATCAATGGTGTCTGATGACTC 3673 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTA 45318 |||||| || || | || || || |||| Sbjct 3674 GACTTCAAGGGTGATTGTCTTCCCAGTTA 3702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451665683560520