Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq195 114 2e-20 >seq195 Length=27450 Score = 114 bits (126), Expect = 2e-20 Identities = 317/483 (66%), Gaps = 16/483 (3%) Strand=Plus/Plus Query 116064 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 116123 |||||| ||||| || ||||| ||||| || || || || ||| |||||||| || Sbjct 4889 CCACATGTCAAATTGAAGGATGCCTTGACTTGCGGGTGAGCCTGGAAAAGTCTCATAAGG 4948 Query 116124 GCCCTCAACCTCCG--CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 116181 ||| || ||| | |||| || | ||||| || ||||| ||||| | || ||| Sbjct 4949 GCCGTC--CCTGAGAGCCAACTCATTGGAAGCCTCTAGAGCTGCATGATATAAAGTTTCA 5006 Query 116182 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAAT- 116240 ||||| || ||| | | |||||| || |||||||||| || | |||||| Sbjct 5007 AAAATCTGAATATTGAGTCTCTTGGCTTCAAGCGAATCAAACG---GAAGCTTCAAAATC 5063 Query 116241 --AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 116298 |||| |||| || || ||||| || || | |||||| ||||| |||||||| || || Sbjct 5064 TGAAATGCATCAGCTAGCCCTTGAACCCCAATGCCAATCGGGCGGTGTCTCATGTTCGAT 5123 Query 116299 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 116358 ||| || | ||| || ||| |||| |||| || | | || | ||| | ||| Sbjct 5124 TTTTTTGCCTCCGGCACTGGGTAATAATTTATATCAATGATTTTGTTCAAATTGTGGGTA 5183 Query 116359 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACA 116418 || |||| || | ||||| || |||| | | || | | | | | | || | Sbjct 5184 ACTTCCTTGGTAACATCATGGAGTTTTTGGAAGTCGTAGTTTCCATCCAC------GATA 5237 Query 116419 TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTAC 116478 || | || ||||| || || |||| ||||| || | ||||| ||| ||| Sbjct 5238 TATGTCGGTAGGGCAATAGATGCCAAGTTACAAACTGCCACTTCATCAGGCGCAGAATAC 5297 Query 116479 TCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 116538 || ||||||||||| || | ||| || || || || || | ||| || || || || Sbjct 5298 TCGATAATTTCCGTGCAAAGATTGGAGGATTTGATAGTTCCAAGGTTTTTCTGGTTCGAT 5357 Query 116539 TTT 116541 ||| Sbjct 5358 TTT 5360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613049086504920