Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq7505 89.7 4e-13 >seq7505 Length=7180 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| || || | ||| | ||| |||||||| || |||||||| ||| Sbjct 1767 CCTCCACGGAGACGGAGAACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGCC 1826 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || || |||| || | |||||| || | ||||| | |||||||||||| | || Sbjct 1827 AATGTTCGGCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGCTGCTGATCAGGCGGG 1886 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTTCC 39669 | ||| |||||||| | | |||| | || | || || | | |||||| | |||| Sbjct 1887 ATGCCCTCTTTGTC-CTGAATTTTAGCCTTCACATTGT--CAATTGTGTCAGACGATTCC 1943 Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAA 39698 || ||||||||||| |||||||| || || Sbjct 1944 ACTTCCAAAGTAATGGTTTTACCGGTCAA 1972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347116699408121