Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq12400 91.5 1e-13 seq7505 91.5 1e-13 >seq12400 Length=4870 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/221 (69%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 133219 ATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCG 133278 ||||||||||||||||| || || || || | | || |||||| ||| | ||| Sbjct 1972 ATTTGAAAGCCGTAAAAACAACGTGCTTCCGCAATTTGAACTTCTCCGCTGAATCTCTCA 2031 Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 | ||||| || ||||||||||| || ||| ||||| || || || || ||||| ||| Sbjct 2032 ATTAGATTCTCATTGACGATGCCATCTGAGGCAGCGAAGAATGCAAGAACATGCTTAATG 2091 Query 133339 AAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCC 133395 ||||| ||||| | || | ||||| ||| || |||| || || || || Sbjct 2092 AAATGTTTCTCGTCCGCATTTAGTTTTTTGTCCCAATCGTGCATGTCTTTAGATAGATCA 2151 Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTA 133436 | || || | ||||||||||| || ||||| |||||| Sbjct 2152 ATTTCTTCCGCCGTCCAAAACGAAGCTTCGGCGCGTTTGTA 2192 >seq7505 Length=7180 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || || || || |||||| | || || ||| || |||||| | | | |||| |||||| Sbjct 2265 ACCGGGAAGACTATCACCCTTGAAGTTGAGTCCTCCGACACCATCGATAACG-TTAAAGC 2207 Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 || || | ||||||||||| ||||| | || ||||| |||||||||| ||||| || Sbjct 2206 CAAGATTCAAGACAAAGAGGGCATTCCTCCGGATCAACAACGGCTCATTTTTGCGGGTAA 2147 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||| |||| || | || || || || || ||||| || || ||| | || || || Sbjct 2146 ACAGTTGGAAGATGGTCGAACTCTTGCTGATTATAACATTCAGAAAGAATCTACTCTTCA 2087 Query 38447 TTTGGTGCT 38455 | | || || Sbjct 2086 TCTCGTCCT 2078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499799314718080