Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq195 114 2e-20 seq1043 82.4 9e-11 >seq195 Length=27450 Score = 114 bits (126), Expect = 2e-20 Identities = 320/480 (67%), Gaps = 16/480 (3%) Strand=Plus/Minus Query 112504 AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAA 112563 |||||||||| || ||||| || || || | || | |||| | | ||||||| || Sbjct 5211 AAAAACTCCATGATGTTACCAAGGAAGTTACCCACAATTTGAACAAAATCATTGATATAA 5152 Query 112564 ATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCG 112623 ||| |||||| || | || ||||| || ||||||||||| || ||||| | | Sbjct 5151 ATTATTACCCAGTGCCGGAGGCAAAAAAATCGAACATGAGACACCGCCCGATTGGCATTG 5092 Query 112624 GTGTCCAAGGTCTCGCGGATGTA-TTCATTCTTTGTCGCCACGCATTTGATTCCGACGAA 112682 | || ||||| || || |||| | |||| |||| || | | |||||||| ||| Sbjct 5091 GGGTTCAAGGGCTAGCTGATGCATTTCAGATTTTGAAGCTTC-CGTTTGATTCGCTTGAA 5033 Query 112683 GCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGT 112742 || ||| | ||||| | || ||||| || | ||||| || ||||| ||||| | Sbjct 5032 GCCAAGAGACTCAATATTCAGATTTTTGAAACTTTATATCATGCAGCTCTAGAGGC---T 4976 Query 112743 TC---GGAGTTGG--CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797 || ||||||| | ||| || || || ||||| || ||| || || || || Sbjct 4975 TCCAATGAGTTGGCTCTCAGG--GACGGCCCTTATGAGACTTTTCCAGGCTCACCCGCAA 4918 Query 112798 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGACTGG 112856 ||||| | ||||||||||| |||| |||| |||| ||||| | | || ||| Sbjct 4917 GTCAAGGCATCCTTCAATTTGACATGT-GGAACGTGAAACCAACGGAATTGTGGGAGTGG 4859 Query 112857 GACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCA 112916 || | | || ||| | || | | || || | || ||||||| | || || Sbjct 4858 GATAGTTTGAAAGAAAAAGTGAAAAACACTGGAATTAGGAATTCTCTTTTGCTTGCTCCT 4799 Query 112917 ATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 ||||| || || || || |||| |||||||| |||||| || |||||||| ||||| Sbjct 4798 ATGCCCACGGCATCGACTAGTCAAATTCTTGGGT-TTAATGAGTGTTTTGAACCTTACAC 4740 >seq1043 Length=17109 Score = 82.4 bits (90), Expect = 9e-11 Identities = 197/293 (67%), Gaps = 15/293 (5%) Strand=Plus/Plus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 |||||||| | ||| || | ||| || || | |||||| | ||| | ||||| ||| | Sbjct 3000 CGATCAAATCTACCAGGTCTAAGTAGAGCTTTATCAAGTACATCTGCTCGATTAGTTCCT 3059 Query 15945 GCGATGACAACAATACCTGTTTCGTT--ATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002 || | ||| || | | |||| | | |||||| ||||||||||| || | || | Sbjct 3060 GCTAAGACGACCACA--TGTTGAGATGTATCAAACCCATCCATCTCAACTAACAATTGAT 3117 Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGT-TG--CTTTC 16059 | | |||| ||| ||||||||||| | ||| | || | | | | || |||| Sbjct 3118 TCAAAGTTGATTCTCGTTCATCATTTCCCCCCATCGCTCCCGATTTCCCTCTGGCTTTTC 3177 Query 16060 CCACGGCATCAATCTCATCAATGAAGACGATGCATG----GTTGATTTTCGCGAGCGACT 16115 | | ||||| || ||||| | |||||||| |||| ||| | ||||| || Sbjct 3178 CAATCGCATCTATTTCATCTACAAAGACGATACATGGTGCGTTCTTCTTCGCTGTCG--- 3234 Query 16116 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 16168 |||| ||||||||||| || | || || || || |||||||||||||| Sbjct 3235 -CAAATAGATCCCGTACTCGTGATGGTCCTACTCCTACGAACATCTCCACAAA 3286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620278883890640