Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq195 140 4e-28 >seq195 Length=27450 Score = 140 bits (154), Expect = 4e-28 Identities = 396/596 (66%), Gaps = 18/596 (3%) Strand=Plus/Plus Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCAT 106005 ||||| |||||||| || |||||| |||||||| |||| || || || || ||||| Sbjct 4740 GTGTAAGGTTCAAAACACTCATTAA-ACCCAAGAATTTGACTAGTCGATGCCGTGGGCAT 4798 Query 106006 TGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATC 106065 || || | ||||||| || | || || | | || | ||| || | | ||| Sbjct 4799 AGGAGCAAGCAAAAGAGAATTCCTAATTCCAGTGTTTTTCACTTTTTCTTTCAAACTATC 4858 Query 106066 CCAGTCGTAG--TTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGG 106123 ||| || | || | |||||||||| |||| |||| ||||||||||| | ||||| Sbjct 4859 CCACTCCCACAATTCCG-TTGGTTTCACGTTCC-ACATGTCAAATTGAAGGATGCCTTGA 4916 Query 106124 GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTC 106183 | ||| || || ||| |||||||| | || | |||||| ||| | Sbjct 4917 CTTGCGGGTGAGCCTGGAAAAGTCTCATAAGGGCCGTCCCTGAGAGCCAACTCATTGGAA 4976 Query 106184 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTC 106242 ||||| || | ||| ||||| | |||||||| || || ||| | ||| ||||||||| Sbjct 4977 GCCTCTAGAGCTGCATGATATAAAGTTTCAAAAATCTGAATATTGAGTCT-CTTGGCTTC 5035 Query 106243 ATCTGAATCAAATGCGTAGCGGCACAAAAT-AAATACATCCGCGAGACCTTGAACACCCA 106301 | |||||||| | | ||| || || | |||| |||| || || |||||||| || | Sbjct 5036 AAGCGAATCAAACG-GAAGCTTCAAAATCTGAAATGCATCAGCTAGCCCTTGAACCCCAA 5094 Query 106302 AACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTC 106361 ||||| || | ||||| ||| || || ||| || | || || ||| ||||| Sbjct 5095 TGCCAATCGGGCGGTGTCTCATGTTCGATTTTTTTGCCTCCGGCACTGGGTAATAATTTA 5154 Query 106362 TGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCAT 106421 | ||||||| | ||| | ||| | |||||| ||| || | ||||| ||||||| Sbjct 5155 TATCAATGATTTTGTTCAAATTGTGGGTAACTTCCTTGGTAACATCATGGAGTTTTT--- 5211 Query 106422 AATCAAAAGTGCGAGTCT-CTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 106480 |||| ||| | | || || ||| | || ||||| || |||||||| || Sbjct 5212 ----GGAAGTCGTAGTTTCCATCCACGATATATGTCGGTAGGGCAATAGATGCCAAGTTA 5267 Query 106481 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGA 106536 ||||| ||| ||||| | | ||||| | |||||| || || | ||||| Sbjct 5268 CAAACTGCCACTTCATCAGGCGCAGAATACTCGATAATTTCCGTGCAAAGATTGGA 5323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589540253961880