Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq7505 163 6e-35 >seq7505 Length=7180 Score = 163 bits (180), Expect = 6e-35 Identities = 155/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | || || |||||||| || ||||| ||||| || ||||| |||||||||| Sbjct 2072 AGTCTGAGGACGAGATGAAGAGTAGATTCTTTCTGAATGTTATAATCAGCAAGAGTTCGA 2131 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | ||| ||||| || || || || |||||||| || ||||||||||| ||| Sbjct 2132 CCATCTTCCAACTGTTTACCCGCAAAAATGAGCCGTTGTTGATCCGGAGGAATGCCCTCT 2191 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||||||||| || || ||||| || |||||||| || || ||||||||||| Sbjct 2192 TTGTCTTGAATCTTGGCTTTAACGTTATCGATGGTGTCGGAGGACTCAACTTCAAGGGTG 2251 Query 195103 ACCGTCTTTCCTGTCAAA 195120 | ||||| || |||||| Sbjct 2252 ATAGTCTTCCCGGTCAAA 2269 Score = 145 bits (160), Expect = 2e-29 Identities = 148/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || ||||| | ||| ||||| ||||| || ||||| || ||||| || | ||||| Sbjct 3512 CAAGACGAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTACGTCCATC 3571 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || || |||||||| || ||||| | ||||| ||||| ||||| || ||||| ||||| Sbjct 3572 CTCAAGTTGCTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATACCTTCCTTGTC 3631 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 |||||| || ||| ||||| ||||||||||| || || ||||||||||| | || Sbjct 3632 TTGAATCTTGGCCTTCACGTTATCAATGGTGTCTGATGACTCGACTTCAAGGGTGATTGT 3691 Query 195108 CTTTCCTGTCAAA 195120 ||| || || ||| Sbjct 3692 CTTCCCAGTTAAA 3704 Score = 134 bits (148), Expect = 3e-26 Identities = 143/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || |||||||| |||||||||||||| || ||||| || | |||| ||||| || Sbjct 1784 AACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGCCAATGTTCGGCCATCCTC 1843 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || || ||||| ||||| || || || || || || || || ||||| |||||||| || Sbjct 1844 AAGTTGTTTACCAGCGAAAATGAGACGCTGCTGATCAGGCGGGATGCCCTCTTTGTCCTG 1903 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| ||| || || ||||| ||||| || ||||||||| | |||| || || Sbjct 1904 AATTTTAGCCTTCACATTGTCAATTGTGTCAGACGATTCCACTTCCAAAGTAATGGTTTT 1963 Query 195111 TCCTGTCAA 195119 || ||||| Sbjct 1964 ACCGGTCAA 1972 Score = 129 bits (142), Expect = 1e-24 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || || || ||||| |||||||| || | || | ||||| ||||| ||||| || Sbjct 3240 GTCGATTCCTTCTGAATGTTGTAATCCGCTAAGGTGCGGCCATCCTCGAGTTGCTTTCCA 3299 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 ||||| || || ||||| ||||| ||||||||||||||||||||||| || || |||| Sbjct 3300 GCGAAAATTAGCCGTTGCTGGTCCGGAGGAATGCCTTCTTTGTCTTGGATCTTAGCCTTG 3359 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119 || || || |||||||| ||| || || || | || | |||||||| ||||| Sbjct 3360 ACATTGTCGATGGTGTCGGAAGACTCAACCTCCAAAGTGATAGTCTTTCCAGTCAA 3415 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || || || | ||||| || || || || |||||||| || || || | || || Sbjct 2365 CAAGACGAGATGCAAGGTGGATTCCTTCTGGATGTTGTAATCTGCGAGGGTGCGACCGTC 2424 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| || |||||||| || ||||| | |||||||||||| || ||||| ||||| ||||| Sbjct 2425 TTCAAGTTGCTTACCGGCAAAGATTAATCGTTGTTGGTCAGGTGGAATACCTTCCTTGTC 2484 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 |||||| || || || || ||||| ||||| || ||| || ||||| || | || Sbjct 2485 TTGAATCTTGGCTTTTACATTATCAATTGTGTCAGACGATTCGACCTCAAGCGTTATTGT 2544 Query 195108 CTTTCCTGTCA 195118 ||| || |||| Sbjct 2545 CTTCCCAGTCA 2555 Score = 84.2 bits (92), Expect = 5e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 195008 AGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGT 195067 |||||||||| ||||||||||||||||| || ||||||||||| || || || || | Sbjct 3948 AGATAAGTCGCTGTTGGTCTGGAGGAATACCCTCTTTGTCTTGGATCTTGGCTTTAACAT 4007 Query 195068 TCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 | || || ||||||||| ||| ||||| | ||| Sbjct 4008 TATCGATCGTGTCCGAAGATTCAACTTCTAAGGT 4041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108632424626279