Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq7505 125 6e-24 >seq7505 Length=7180 Score = 125 bits (138), Expect = 6e-24 Identities = 138/184 (75%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| ||||||||||| || || || ||||| || | ||||| |||| ||||| || Sbjct 2086 ATGAAGAGTAGATTCTTTCTGAATGTTATAATCAGCAAGAGTTCGACCATCTTCCAACTG 2145 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||||| ||||| || | || |||||||| || |||||||| ||||| |||||||| || Sbjct 2146 TTTACCCGCAAAAATGAGCCGTTGTTGATCCGGAGGAATGCCCTCTTTGTCTTGAATCTT 2205 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| || | || | ||||| || | || |||||||| |||| || || ||||| Sbjct 2206 GGCTTTAACGTTATCGATGGTGTCGGAGGACTCAACTTCAAGGGTGATAGTCTTCCCGGT 2265 Query 101446 TAAA 101449 ||| Sbjct 2266 CAAA 2269 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | || ||| | || | ||| | |||||||| ||||| || |||||||| || Sbjct 2924 CCTCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCAGCT 2983 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | ||| ||||| ||||| ||||| ||||| ||||| || ||| Sbjct 2984 AGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGA 3043 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || ||| || ||| | || | || || || | ||| || Sbjct 3044 ATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTCAACC 3103 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAA 101448 || || || | || ||||||||||| Sbjct 3104 TCGAGTGTAATAGTCTTGCCGGTTAA 3129 Score = 100 bits (110), Expect = 2e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || ||||| ||||| || ||||| || || |||| ||| | |||| || | ||| Sbjct 2662 ATGCAGAGTAGACTCTTTCTGGATATTATAGTCAGCGAGAGTACGCCCATCCTCAAGTTG 2721 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || ||||| || |||||||| || || |||||||| ||||||||||| || Sbjct 2722 CTTGCCAGCGAAAATCAACCGTTGTTGATCTGGTGGGATGCCTTCCTTATCTTGAATCTT 2781 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||| | || | ||||| || | ||| || || | ||| | || || || || Sbjct 2782 GGCCTTTACGTTATCGATGGTGTCGGAGGATTCTACCTCCAAAGTAATGGTCTTTCCAGT 2841 Query 101446 TAA 101448 || Sbjct 2842 CAA 2844 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| || |||| || | ||| | ||| ||||| || || || |||||||| || Sbjct 3210 CCACCTCGCAAGCGTAGTACCAGATGCAAGGTCGATTCCTTCTGAATGTTGTAATCCGCT 3269 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | |||||| || || || || | || || || || || ||| Sbjct 3270 AAGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAAATTAGCCGTTGCTGGTCCGGAGGA 3329 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||||||||| ||||| || || || ||| | || | ||||| || | || || Sbjct 3330 ATGCCTTCTTTGTCTTGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 3389 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAA 101448 || | ||||| || || || || || Sbjct 3390 TCCAAAGTGATAGTCTTTCCAGTCAA 3415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395989891616109