Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq195 111 8e-20 >seq195 Length=27450 Score = 111 bits (122), Expect = 8e-20 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| ||||| |||||||| | || ||||| | || | |||| ||||||| || Sbjct 5727 CATAAACAAATCAGGAATCCAGAGCGCGTAAAAGAGGTCCCGAGCTCGATTTTCTTCCTT 5786 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 ||||||||| ||| | || ||||| | ||||| ||||||| ||||||||||| | ||| Sbjct 5787 TCCGTGATTTTTTCTCAGGTCTAACCAGTCAAAGATATCTGCATGCCATGGTTCAAGATA 5846 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGT 26106 |||||||||| || ||| || ||||| ||||| || || | ||||| Sbjct 5847 GATAGCAAAAGCGCCGGGTCTCTTGTTGCCACCCTGATCAACATACCGCGCAGT 5900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252855775572275