Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq122 149 7e-31 >seq122 Length=30057 Score = 149 bits (164), Expect = 7e-31 Identities = 216/298 (72%), Gaps = 8/298 (3%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 |||| || ||| ||||| ||||||| ||| || | |||||| | | |||||| | | Sbjct 25065 CCATTTGGACCGTGATAAACTGCATAAAATGAAGCTAAATTTGCTAATAATGCTTGAGAT 25124 Query 139323 GTGCAGATGTTACTGGT--TGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTG 139380 || || | ||| || | |||||| ||||||||||| || || ||||||||||||| | Sbjct 25125 GTACAAACGTT--TGATAATGCTTTATCTCTTCTAATGTGTTGTTCTCTAGTTTGTAAGG 25182 Query 139381 CTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTA 139440 |||||| |||||||| || || | | || ||| |||||| | ||| ||||| | Sbjct 25183 TTAATCTATATGCAGGTTTACCATTAATATCTTTTGAAAGACCTATTAATCTACCAGGAA 25242 Query 139441 TCTTTC-TCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 | || | ||| | | ||| || | |||||||||||||||||||||| || || || Sbjct 25243 TTTTACGAGTTAAAGAT-TCTTTTACTACAAAGAATGCAGCATGAGGACCACCATAACCT 25301 Query 139500 ATAGGAATACCAAACCTTTGCA-TACTACCTACAGCAATATCAAATCCCCACTCACCT 139556 | ||| | |||||| | | ||| || |||| | ||| |||||| ||||| |||||| Sbjct 25302 AAAGGTACACCAAATC-TAGCACTATTACCAAAAGCTATATCAGCACCCCATTCACCT 25358 Score = 136 bits (150), Expect = 5e-27 Identities = 264/380 (69%), Gaps = 10/380 (3%) Strand=Plus/Plus Query 138173 ATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAA 138232 |||| |||||| || || || || || || || ||||| |||||||| ||||| | || Sbjct 23562 ATGTGATGCTACTCCGATTGGTCCCACTCCCGGTCCTCCTCCTCCATGCGGAATTCCAAA 23621 Query 138233 TGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACC 138292 ||||| |||||||||| |||||| ||||| || ||| | | ||| || | | || Sbjct 23622 GGTCTTGTGTAAATTTAAATGACAAACATCAGCTCCACACTTTACTGGATTAGTCAATCC 23681 Query 138293 TACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGAT 138352 | ||||| || | ||| |||||||| | || ||||||||||||| ||||| || Sbjct 23682 AATTTGTGCGTTCATATTAGCACCATCCATGTAAACCTGACCACCATATCGATGAATAAT 23741 Query 138353 CTTACA--TATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410 | ||| |||| ||| | |||||||||||||| ||| || |||||||||||| Sbjct 23742 TTCACAAGCATCTTGAACATG--AGCTTCAAATACACCATAAGTAGAAGGATATGTAATC 23799 Query 138411 ATAATACATGAGAGTTCA-AATG-TATTCATGATTGCTTTCTTCTCTAGATCTTTGATGT 138468 ||||| | | |||| || |||| ||| ||||| |||| ||||| | | Sbjct 23800 ATAATCGCGGCTAATTCATTCTGATATT-TTGA-AGCTTTTGATTCTAAATCTTCTAAAT 23857 Query 138469 CTATGTTGCCATC-ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCA 138527 ||| |||||| |||| | || | | ||||||||||||||||||||||| Sbjct 23858 CTAATGAGCCATCTTTCAT-AGTTTTAATTGGAATGACTTTCATTCCTGCCATGACTGCT 23916 Query 138528 CTAGCAGGATTAGTTCCATG 138547 || ||||| || ||||| Sbjct 23917 GATGCTGGATTTGTACCATG 23936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578566054657240