Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq7505 111 3e-19 >seq7505 Length=7180 Score = 111 bits (122), Expect = 3e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||| ||| || |||||||||||||| || | || || ||| || || || Sbjct 3207 ATACCACCTCGCAAGCGTAGTACCAGATGCAAGGTCGATTCCTTCTGAATGTTGTAATCC 3266 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | ||| || | ||| || | ||| ||||| || ||||||| | || || || ||| Sbjct 3267 GCTAAGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAAATTAGCCGTTGCTGGTCCGGA 3326 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| || || | || | ||| || || |||||||||||| Sbjct 3327 GGAATGCCTTCTTTGTCTTGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAAGACTCA 3386 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 || || | ||| ||||| || || || Sbjct 3387 ACCTCCAAAGTGATAGTCTTTCCAGT 3412 Score = 96.9 bits (106), Expect = 6e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 || || ||||| | |||| ||||| ||| ||||| || | | |||| | ||| Sbjct 2078 AGGACGAGATGAAGAGTAGATTCTTTCTGAATGTTATAATCAGCAAGAGTTCGACCATCT 2137 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || || ||||| || |||||||| | | |||||||| ||||| || || ||||| ||| Sbjct 2138 TCCAACTGTTTACCCGCAAAAATGAGCCGTTGTTGATCCGGAGGAATGCCCTCTTTGTCT 2197 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 || || |||| ||| | || || || ||||| ||||||||||| || || ||||| Sbjct 2198 TGAATCTTGGCTTTAACGTTATCGATGGTGTCGGAGGACTCAACTTCAAGGGTGATAGTC 2257 Query 193329 TTACCTGT 193336 || || || Sbjct 2258 TTCCCGGT 2265 Score = 93.3 bits (102), Expect = 8e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | || || ||||| ||||||| |||| |||||| ||||||||||| Sbjct 2636 ATACCACCACGCAGACGGAGTACAAGATGCAGAGTAGACTCTTTCTGGATATTATAGTCA 2695 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | ||| || | ||| || || || ||||| || | |||||||| || Sbjct 2696 GCGAGAGTACGCCCATCCTCAAGTTGCTTGCCAGCGAAAATCAACCGTTGTTGATCTGGT 2755 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| |||||||| || |||| |||| || || || ||||| || || Sbjct 2756 GGGATGCCTTCCTTATCTTGAATCTTGGCCTTTACGTTATCGATGGTGTCGGAGGATTCT 2815 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 || || | ||| || || || || || Sbjct 2816 ACCTCCAAAGTAATGGTCTTTCCAGT 2841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898982616813840