Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq12400 102 1e-16 >seq12400 Length=4870 Score = 102 bits (112), Expect = 1e-16 Identities = 125/170 (74%), Gaps = 3/170 (2%) Strand=Plus/Plus Query 18533 AATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACA 18592 ||||| || | | ||||||||| || || || || | | ||||| ||||| | |||| Sbjct 2023 AATCTCTCAATTAGATTCTCATTGACGATGCCATCTGAGGCAGCGAAGAATGCAAGAACA 2082 Query 18593 TATTTAATGAAATGTTTTTCATTATCCTTGAG---ATTGTTCCATTCATCTATATCTTTT 18649 | |||||||||||||| || | | || || |||| ||| || | || ||||| Sbjct 2083 TGCTTAATGAAATGTTTCTCGTCCGCATTTAGTTTTTTGTCCCAATCGTGCATGTCTTTA 2142 Query 18650 GATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTA 18699 |||||||||| |||||||| |||||||| || | |||||| ||||||| Sbjct 2143 GATAGATCAATTTCTTCCGCCGTCCAAAACGAAGCTTCGGCGCGTTTGTA 2192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731325502029200