Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7505 123 2e-23 >seq7505 Length=7180 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 24726 TAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAAC 24785 ||||||| || |||||||| ||||| || ||| || |||| || | || | || || Sbjct 3128 TAACCGGCAAGACTATTACACTCGAGGTTGAATCCTCCGATACGATTGATAATGTCAAGG 3069 Query 24786 AAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGA 24845 ||||||||||||||| ||||| || || || ||||| || || ||||||||||| || | Sbjct 3068 CAAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAGCAGCGATTGATCTTTGCTGGTA 3009 Query 24846 AACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTAC 24905 |||| || || ||| | | | | | ||||| ||||||||||||||||| || | | Sbjct 3008 AACAACTAGAAGATGGCCGTACCCTAGCTGATTACAACATTCAAAAGGAATCTACTTTGC 2949 Query 24906 ACTTGGTGTTGCGATTGCGCGGAGGC 24931 | | ||| | || | || |||||| Sbjct 2948 ATCTCGTGCTCCGTCTACGTGGAGGC 2923 Score = 118 bits (130), Expect = 1e-21 Identities = 139/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACA 24786 ||||| || ||||| || || ||||| || || ||||||| | || |||| |||| | Sbjct 2265 ACCGGGAAGACTATCACCCTTGAAGTTGAGTCCTCCGACACCATCGATAACGTTAAAGCC 2206 Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 || ||| ||||||||||| || || ||||| ||||||||||| | || ||||| || || Sbjct 2205 AA-GATTCAAGACAAAGAGGGCATTCCTCCGGATCAACAACGGCTCATTTTTGCGGGTAA 2147 Query 24847 ACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTA 24904 |||| |||| ||| |||| | | || | |||||||||||||| || ||||| || || Sbjct 2146 ACAGTTGGAAGATGGTCGA-ACTCTTG-CTGATTATAACATTCAGAAAGAATCTACTCTT 2089 Query 24905 CA 24906 || Sbjct 2088 CA 2087 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 24725 CTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAA 24784 || || || || || || ||||| || || ||| | | |||||| | || | |||||| Sbjct 2556 CTGACTGGGAAGACAATAACGCTTGAGGTCGAATCGTCTGACACAATTGATAATGTAAAA 2497 Query 24785 CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGG 24844 ||||| |||||||| ||||| || || || || |||||||| || ||||||||||| Sbjct 2496 GCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAACAACGATTAATCTTTGCCGGT 2437 Query 24845 AAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTA 24904 || || || || || | | | | ||||||| ||||| || |||||||| || | Sbjct 2436 AAGCAACTTGAAGACGGTCGCACCCTCGCAGATTACAACATCCAGAAGGAATCCACCTTG 2377 Query 24905 CACTTGGTGTTGCGATTGCGCGGAGG 24930 || | || ||||| |||||||||| Sbjct 2376 CATCTCGTCTTGCGTCTGCGCGGAGG 2351 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||||||||| ||||| | ||||| ||| | | |||||| | || | || || Sbjct 1969 ACCGGTAAAACCATTACTTTGGAAGTGGAATCGTCTGACACAATTGACAATGTGAAGGCT 1910 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 || || || |||||||| || || || || ||||| || ||| | || || || || ||| Sbjct 1909 AAAATTCAGGACAAAGAGGGCATCCCGCCTGATCAGCAGCGTCTCATTTTCGCTGGTAAA 1850 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 || || |||||| ||| || ||||||||||||||||||| || || || || || Sbjct 1849 CAACTTGAGGATGGCCGAACATTGGCAGATTATAACATTCAAAAAGAGTCAACTCTTCA 1791 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 24726 TAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAAC 24785 |||| || || || || || || ||||| || | | ||||| | || | || || Sbjct 3702 TAACTGGGAAGACAATCACCCTTGAAGTCGAGTCATCAGACACCATTGATAACGTGAAGG 3643 Query 24786 AAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGA 24845 ||||| |||||||| ||||| || ||||| || || ||||| ||||||||||| || | Sbjct 3642 CCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAGCAACGCTTGATCTTTGCTGGTA 3583 Query 24846 AACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTAC 24905 | || || |||||| | | | | |||| || ||||| |||||||| || || | | Sbjct 3582 AGCAACTTGAGGATGGACGTACCCTTGCAGACTACAACATCCAAAAGGAGTCTACTTTGC 3523 Query 24906 ACTTGGTGTTGCGATTGCGCGGAGG 24930 || | || ||||| | ||||| || Sbjct 3522 ACCTCGTCTTGCGTCTTCGCGGTGG 3498 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||||||||| || ||||| || || ||||| | || || || || || Sbjct 3352 AAGATCCAAGACAAAGAAGGCATTCCTCCGGACCAGCAACGGCTAATTTTCGCTGGAAAG 3293 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || |||||| | | | | | ||||| |||||||| ||||||||||| | || Sbjct 3292 CAACTCGAGGATGGCCGCACCTTAGCGGATTACAACATTCAGAAGGAATCGACCTTGCAT 3233 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 |||| | || ||||| || || Sbjct 3232 CTGGTACTACGCTTGCGAGGTGG 3210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449561655838360