Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq7505 102 7e-17 >seq7505 Length=7180 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 110293 TTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAA 110352 ||| ||||| || || || ||| | ||| ||| | ||| || ||| | || || Sbjct 2269 TTTGACCGGGAAGACTATCACCCTTGAAGTTGAGTCCTCCGACACCATCGATAACGTTAA 2210 Query 110353 ACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGG 110412 | |||||| |||||||| ||| | || |||||||||| | || |||| |||||| Sbjct 2209 AGCCAAGATTCAAGACAAAGAGGGCATTCCTCCGGATCAACAACGGCTCATTTTTGCGGG 2150 Query 110413 TAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTT 110472 ||||||| |||| |||| |||| | || ||||| |||||||| ||||||||||| | Sbjct 2149 TAAACAGTTGGAAGATGGTCGAACTCTTGCTGATTATAACATTCAGAAAGAATCTACTCT 2090 Query 110473 GCACATGGTGTTAAGACTGCGAGGGGGAA 110501 || | || | ||||| || || |||| Sbjct 2089 TCATCTCGTCCTCAGACTTCGTGGAGGAA 2061 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/191 (70%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA---GCCTGACGATACT 110338 ||| |||| | || ||||| ||||||||||| | ||| ||| | ||||| || Sbjct 1984 TTTCTCAACAGCTTGACCGGTAAAACCATTACTTTGGAAGTGGAATCGTCTGAC---ACA 1928 Query 110339 GTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGA 110398 | | | | || || || ||| |||||||| ||| | || ||||| || | Sbjct 1927 ATTGACAATGTGAAGGCTAAAATTCAGGACAAAGAGGGCATCCCGCCTGATCAGCAGCGT 1868 Query 110399 CTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAA 110458 || |||| || |||||||| || ||||||| | ||||| |||| ||||| ||||||||| Sbjct 1867 CTCATTTTCGCTGGTAAACAACTTGAGGATGGCCGAACATTGGCAGATTATAACATTCAA 1808 Query 110459 AAAGAATCTAC 110469 ||||| || || Sbjct 1807 AAAGAGTCAAC 1797 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 |||||||||||| | || ||| || ||| | || |||| || || || || || ||| Sbjct 3343 GACAAAGAAGGCATTCCTCCGGACCAGCAACGGCTAATTTTCGCTGGAAAGCAACTCGAG 3284 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| | | || | ||||||||||||||||| || ||||| || ||||| |||| || Sbjct 3283 GATGGCCGCACCTTAGCGGATTACAACATTCAGAAGGAATCGACCTTGCATCTGGTACTA 3224 Query 110486 AGACTGCGAGGGGG 110499 | ||||||| || Sbjct 3223 CGCTTGCGAGGTGG 3210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412541032866341