Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq7505 156 8e-33 >seq7505 Length=7180 Score = 156 bits (172), Expect = 8e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| || || | ||||||||||| |||||||| |||||||| |||| Sbjct 2637 TACCACCACGCAGACGGAGTACAAGATGCAGAGTAGACTCTTTCTGGATATTATAGTCAG 2696 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | || || || ||||| || ||||| || || | | |||||||||||| | Sbjct 2697 CGAGAGTACGCCCATCCTCAAGTTGCTTGCCAGCGAAAATCAACCGTTGTTGATCTGGTG 2756 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||||||||||||||| || ||||| || || || || || | ||||| Sbjct 2757 GGATGCCTTCCTTATCTTGAATCTTGGCCTTTACGTTATCGATGGTGTCGGAGGATTCTA 2816 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 | |||||||| || ||||| || |||||| Sbjct 2817 CCTCCAAAGTAATGGTCTTTCCAGTCAAC 2845 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | || ||||| || | |||| || ||||| ||||| || || ||||| | Sbjct 2349 TACCTCCGCGCAGACGCAAGACGAGATGCAAGGTGGATTCCTTCTGGATGTTGTAATCTG 2408 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | ||||||||| ||||| || || |||||||||| || |||||| || || | Sbjct 2409 CGAGGGTGCGACCGTCTTCAAGTTGCTTACCGGCAAAGATTAATCGTTGTTGGTCAGGTG 2468 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| ||||||||||| ||||| || ||| | ||| | Sbjct 2469 GAATACCTTCCTTGTCTTGAATCTTGGCTTTTACATTATCAATTGTGTCAGACGATTCGA 2528 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCA 82788 | || | ||||| ||||| || |||| Sbjct 2529 CCTCAAGCGTTATTGTCTTCCCAGTCA 2555 Score = 147 bits (162), Expect = 4e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| || || | |||| ||||||||| || || || || ||||||| | Sbjct 2924 CCTCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCAGCT 2983 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || |||||||||||||| ||||||||||| | || || |||||||| || Sbjct 2984 AGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGA 3043 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| ||||| |||||||| || ||||| ||||||||||| | ||| || Sbjct 3044 ATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTCAACC 3103 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAA 82789 || | || || |||||||| || || Sbjct 3104 TCGAGTGTAATAGTCTTGCCGGTTAA 3129 Score = 131 bits (144), Expect = 3e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||||||||||||||| || |||||||||| ||| ||| ||| ||||| | ||| Sbjct 2087 TGAAGAGTAGATTCTTTCTGAATGTTATAATCAGCAAGAGTTCGACCATCTTCCAACTGT 2146 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || ||||| || || | ||||||||| ||||| || || || || ||||||||||| Sbjct 2147 TTACCCGCAAAAATGAGCCGTTGTTGATCCGGAGGAATGCCCTCTTTGTCTTGAATCTTG 2206 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| || || || || || || | || ||||| | || || ||||| || ||| Sbjct 2207 GCTTTAACGTTATCGATGGTGTCGGAGGACTCAACTTCAAGGGTGATAGTCTTCCCGGTC 2266 Query 82788 AA 82789 || Sbjct 2267 AA 2268 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| ||||||| || ||||| || ||||| || || |||||||| | Sbjct 1767 CCTCCACGGAGACGGAGAACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGCC 1826 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | ||| || || || |||||||| ||||| || || || | || ||||| || || Sbjct 1827 AATGTTCGGCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGCTGCTGATCAGGCGGG 1886 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || || || ||||| || || || ||||| ||||| || ||| | ||| ||| Sbjct 1887 ATGCCCTCTTTGTCCTGAATTTTAGCCTTCACATTGTCAATTGTGTCAGACGATTCCACT 1946 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAA 82789 |||||||| || || || || ||||| Sbjct 1947 TCCAAAGTAATGGTTTTACCGGTCAA 1972 Score = 96.9 bits (106), Expect = 7e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||||| || | ||||| |||||| || || || || || || || | Sbjct 3496 TACCACCGCGAAGACGCAAGACGAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCTG 3555 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || ||||| || ||||||||||| | | ||| || || |||| Sbjct 3556 CAAGGGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAG 3615 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| || || || || ||||| || || | || | Sbjct 3616 GGATACCTTCCTTGTCTTGAATCTTGGCCTTCACGTTATCAATGGTGTCTGATGACTCGA 3675 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAA 82789 |||| | || || ||||| || || || Sbjct 3676 CTTCAAGGGTGATTGTCTTCCCAGTTAA 3703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981075728790843