Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq195 111 4e-19 >seq195 Length=27450 Score = 111 bits (122), Expect = 4e-19 Identities = 133/180 (74%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 110724 TATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGG 110780 ||||| |||| ||||| || |||| ||| | |||||||||||||| ||||| ||| Sbjct 5891 TATGTTGATCAGGGTGGCAACAAGAGACCCGGCGCTTTTGCTATCTATCTTGAACCATGG 5832 Query 110781 CATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGA 110840 ||| ||||||| ||||| | ||||| || | |||||||| ||| |||||| | || Sbjct 5831 CATGCAGATATCTTTGACTGGTTAGACCTGAGAAAAAATCACGGAAAGGAAGAAAATCGA 5772 Query 110841 GCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAA 110900 || || || | ||||| || | |||||| | ||||| || |||| ||| ||| || || Sbjct 5771 GCTCGGGACCTCTTTTACGCGCTCTGGATTCCTGATTTGTTTATGACACGAGTTGAACAA 5712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185904436848257