Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq7505 107 5e-18 >seq7505 Length=7180 Score = 107 bits (118), Expect = 5e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA-ATCAGTAAAGCA 206252 || || || || ||||| | ||||| || || ||||| |||| | | |||||| Sbjct 2265 ACCGGGAAGACTATCACCCTTGAAGTTGAGTCCTCCGACACCATCGATAACGTTAAAGCC 2206 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| ||||| || ||| ||||| ||| | || || || || || || Sbjct 2205 AA-GATTCAAGACAAAGAGGGCATTCCTCCGGATCAACAACGGCTCATTTTTGCGGGTAA 2147 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 |||||||||||||| | ||| | || ||||| ||| | |||||||| ||||||||||| Sbjct 2146 ACAGTTGGAAGATGGTCGAACTCTTGCTGATTATAACATTCAGAAAGAATCTACTCTTCA 2087 Query 206373 CCTTGTTTTGAGACTTCG 206390 || || | |||||||| Sbjct 2086 TCTCGTCCTCAGACTTCG 2069 Score = 96.9 bits (106), Expect = 8e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||| || ||||||||||||||||||| |||||||||||| | ||| | ||||| || Sbjct 2657 ACAAGATGCAGAGTAGACTCTTTCTGGATATTATAGTCAGCGAGAGTACGCCCATCCTCA 2716 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || ||||| || ||||| || | |||||||||| Sbjct 2717 AGTTGCTTGCCAGCGAAAATCAACCGTTGTTGA 2749 Score = 96.9 bits (106), Expect = 8e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || ||||||||||| || || ||| ||||| |||| || ||| Sbjct 3412 ACTGGAAAGACTATCACTTTGGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGGCT 3353 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||| ||| |||||| ||| | || || ||||| |||||| Sbjct 3352 AAGATCCAAGACAAAGAAGGCATTCCTCCGGACCAGCAACGGCTAATTTTCGCTGGAAAG 3293 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTAC 206366 || | || ||||| | || || || ||||||||| | ||||| || || || Sbjct 3292 CAACTCGAGGATGGCCGCACCTTAGCGGATTACAACATTCAGAAGGAATCGAC 3240 Score = 93.3 bits (102), Expect = 1e-13 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| || ||||||||||||||| ||||||||| | || || ||| Sbjct 1969 ACCGGTAAAACCATTACTTTGGAAGTGGAATCGTCTGACACAATTGACAATGTGAAGGCT 1910 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || ||||| || ||||| || || ||| || || | || || ||||| || || Sbjct 1909 AAAATTCAGGACAAAGAGGGCATCCCGCCTGATCAGCAGCGTCTCATTTTCGCTGGTAAA 1850 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | || ||||| | || ||||| ||||| ||| | || |||||||| |||||||| Sbjct 1849 CAACTTGAGGATGGCCGAACATTGGCAGATTATAACATTCAAAAAGAGTCAACTCTTCAT 1790 Query 206374 CTTGTT 206379 || ||| Sbjct 1789 CTAGTT 1784 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 |||||||| | || || ||||||||||| |||||||| | ||||| ||||| | ||| Sbjct 2069 CGAAGTCTGAGGACGAGATGAAGAGTAGATTCTTTCTGAATGTTATAATCAGCAAGAGTT 2128 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||||| ||| || || || || || |||||||||||| Sbjct 2129 CGACCATCTTCCAACTGTTTACCCGCAAAAATGAGCCGTTGTTGA 2173 Score = 91.5 bits (100), Expect = 3e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || || |||||||| || ||| || ||||| |||| |||||| Sbjct 2841 ACTGGAAAGACCATTACTTTGGAGGTAGAATCCTCCGACACCATCGATAACGTAAAGGCC 2782 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| || || || ||| | | || ||||| || ||| Sbjct 2781 AAGATTCAAGATAAGGAAGGCATCCCACCAGATCAACAACGGTTGATTTTCGCTGGCAAG 2722 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | || ||||| | ||| | || || || || ||||||||||||||||||| || Sbjct 2721 CAACTTGAGGATGGGCGTACTCTCGCTGACTATAATATCCAGAAAGAGTCTACTCTGCAT 2662 Query 206374 CTTGT 206378 ||||| Sbjct 2661 CTTGT 2657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180916257626777