Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq7505 96.9 3e-15 >seq7505 Length=7180 Score = 96.9 bits (106), Expect = 3e-15 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| ||||||||||| ||||| ||||| ||||| | || || || || ||||| || || Sbjct 1802 CTCTTTTTGAATGTTATAATCTGCCAATGTTCGGCCATCCTCAAGTTGTTTACCAGCGAA 1861 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAG 35663 || | |||||||| || | || | || ||| |||||| ||| ||| | ||||| | Sbjct 1862 AATGAGACGCTGCTGATCAGGCGGGATGCCCTCTTTGTCC-TGAATTTTAGCCTTCACAT 1920 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAA 35715 | | | ||||| ||||||||| |||| || || |||||||| ||||| Sbjct 1921 TGTCAATTGTGTCAGACGATTCCACTTCCAAAGTAATGGTTTTACCGGTCAA 1972 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||||| | | ||| | ||| || ||| |||||||||||||||||||| || Sbjct 2924 CCTCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCAGCT 2983 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || || || ||||| ||||| ||||| |||||||| || | ||| Sbjct 2984 AGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGA 3043 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||||||| ||| | | | | | ||| ||| ||||| ||| Sbjct 3044 ATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTCAACC 3103 Query 35690 TCCACCGTGATCGTTTTACCCGTCAA 35715 || | || || || || || || || Sbjct 3104 TCGAGTGTAATAGTCTTGCCGGTTAA 3129 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || || | | |||| ||| || || ||||| |||||||||||||| || Sbjct 3210 CCACCTCGCAAGCGTAGTACCAGATGCAAGGTCGATTCCTTCTGAATGTTGTAATCCGCT 3269 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || | || || || ||||| || || || || | ||| |||||||||| |||| Sbjct 3270 AAGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAAATTAGCCGTTGCTGGTCCGGAGGA 3329 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || || ||||| |||||| ||| | | | | | |||||| || || ||| Sbjct 3330 ATGCCTTCTTTGTCTTGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 3389 Query 35690 TCCACCGTGATCGTTTTACCCGTCAA 35715 |||| ||||| || || || ||||| Sbjct 3390 TCCAAAGTGATAGTCTTTCCAGTCAA 3415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450456986783960