Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq195 113 5e-20 seq1043 82.4 9e-11 >seq195 Length=27450 Score = 113 bits (124), Expect = 5e-20 Identities = 235/342 (69%), Gaps = 11/342 (3%) Strand=Plus/Minus Query 105114 AAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAA 105173 |||||||||| || ||||| || || ||| | || | |||| | | ||||||| || Sbjct 5211 AAAAACTCCATGATGTTACCAAGGAAGTTACCCACAATTTGAACAAAATCATTGATATAA 5152 Query 105174 ATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCG 105233 ||| |||||| || | || ||||| || ||||||||||| || ||||| | | Sbjct 5151 ATTATTACCCAGTGCCGGAGGCAAAAAAATCGAACATGAGACACCGCCCGATTGGCATTG 5092 Query 105234 GTGTTCAGGGTCTCGCGGATGTA-TTCATTCTTTGTCGCCACGCATTTGATTCCGACGAA 105292 | ||||| || || || |||| | |||| |||| || | | |||||||| ||| Sbjct 5091 GGGTTCAAGGGCTAGCTGATGCATTTCAGATTTTGAAGCTTC-CGTTTGATTCGCTTGAA 5033 Query 105293 GCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGT 105352 || ||| | ||||| | || ||||| || | ||||| || ||||| ||||| | Sbjct 5032 GCCAAGAGACTCAATATTCAGATTTTTGAAACTTTATATCATGCAGCTCTAGAGGC--TT 4975 Query 105353 TCA--GAGTTGG--CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 105408 || ||||||| | ||| || || || ||||| || ||| || || || || Sbjct 4974 CCAATGAGTTGGCTCTCAGG--GACGGCCCTTATGAGACTTTTCCAGGCTCACCCGCAAG 4917 Query 105409 ACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA 105450 ||||| | ||||||||||| |||| |||| |||| ||||| Sbjct 4916 TCAAGGCATCCTTCAATTTGACATGT-GGAACGTGAAACCAA 4876 >seq1043 Length=17109 Score = 82.4 bits (90), Expect = 9e-11 Identities = 198/293 (68%), Gaps = 15/293 (5%) Strand=Plus/Plus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 |||||||| | ||| || | ||| || || | |||||| | ||| | ||||| || | Sbjct 3000 CGATCAAATCTACCAGGTCTAAGTAGAGCTTTATCAAGTACATCTGCTCGATTAGTTCCT 3059 Query 9584 GCGATGACAACAATACCTGTTTC-AT-TATCAAAACCATCCATCTCTGTCAAAAGTTGGT 9641 || | ||| || | | |||| || ||||||| ||||||||||| || | ||| | Sbjct 3060 GCTAAGACGACCACA--TGTTGAGATGTATCAAACCCATCCATCTCAACTAACAATTGAT 3117 Query 9642 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGT-TG--CTTTC 9698 | | |||| ||| ||||||||||| | ||| | || | | | | || |||| Sbjct 3118 TCAAAGTTGATTCTCGTTCATCATTTCCCCCCATCGCTCCCGATTTCCCTCTGGCTTTTC 3177 Query 9699 CCACGGCATCAATCTCATCAATGAAGACGATGCATG----GTTGATTTTCGCGAGCGACT 9754 | | ||||| || ||||| | |||||||| |||| ||| | ||||| || Sbjct 3178 CAATCGCATCTATTTCATCTACAAAGACGATACATGGTGCGTTCTTCTTCGCTGTCG--- 3234 Query 9755 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 9807 |||| ||||||||||| || | || || || || |||||||||||||| Sbjct 3235 -CAAATAGATCCCGTACTCGTGATGGTCCTACTCCTACGAACATCTCCACAAA 3286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582825271869880